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Peripheral tissues reprogram CD8+ T cells for pathogenicity during graft-versus-host disease
Pedro Santos e Sousa, Séverine Ciré, Thomas Conlan, Laura Jardine, Claire Tkacz, Ivana R. Ferrer, Cara Lomas, Sophie Ward, Heather West, Simone Dertschnig, Sven Blobner, Terry K. Means, Stephen Henderson, Daniel H. Kaplan, Matthew Collin, Vincent Plagnol, Clare L. Bennett, Ronjon Chakraverty
Pedro Santos e Sousa, Séverine Ciré, Thomas Conlan, Laura Jardine, Claire Tkacz, Ivana R. Ferrer, Cara Lomas, Sophie Ward, Heather West, Simone Dertschnig, Sven Blobner, Terry K. Means, Stephen Henderson, Daniel H. Kaplan, Matthew Collin, Vincent Plagnol, Clare L. Bennett, Ronjon Chakraverty
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Research Article Immunology Transplantation

Peripheral tissues reprogram CD8+ T cells for pathogenicity during graft-versus-host disease

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Abstract

Graft-versus-host disease (GVHD) is a life-threatening complication of allogeneic stem cell transplantation induced by the influx of donor-derived effector T cells (TE) into peripheral tissues. Current treatment strategies rely on targeting systemic T cells; however, the precise location and nature of instructions that program TE to become pathogenic and trigger injury are unknown. We therefore used weighted gene coexpression network analysis to construct an unbiased spatial map of TE differentiation during the evolution of GVHD and identified wide variation in effector programs in mice and humans according to location. Idiosyncrasy of effector programming in affected organs did not result from variation in T cell receptor repertoire or the selection of optimally activated TE. Instead, TE were reprogrammed by tissue-autonomous mechanisms in target organs for site-specific proinflammatory functions that were highly divergent from those primed in lymph nodes. In the skin, we combined the correlation-based network with a module-based differential expression analysis and showed that Langerhans cells provided in situ instructions for a Notch-dependent T cell gene cluster critical for triggering local injury. Thus, the principal determinant of TE pathogenicity in GVHD is the final destination, highlighting the need for target organ–specific approaches to block immunopathology while avoiding global immune suppression.

Authors

Pedro Santos e Sousa, Séverine Ciré, Thomas Conlan, Laura Jardine, Claire Tkacz, Ivana R. Ferrer, Cara Lomas, Sophie Ward, Heather West, Simone Dertschnig, Sven Blobner, Terry K. Means, Stephen Henderson, Daniel H. Kaplan, Matthew Collin, Vincent Plagnol, Clare L. Bennett, Ronjon Chakraverty

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Figure 2

TE effector program diversity in SLO and peripheral tissues is tissue autonomous and TCR repertoire independent.

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TE effector program diversity in SLO and peripheral tissues is tissue au...
(A) Left: Experimental setup of the F→M BMT model. Right, top graph: Kaplan-Meier survival curve (log-rank Mantel-Cox test). Right, bottom graph: clinical GVHD score over time (mean ± SD). BM only (n = 6), BM + T cells (n = 11). (B) MDS plot showing the proximity of transcriptional profiles of donor-derived CD8+ T cells isolated from different organs. (C) Graph showing the FDR q value (bars) and NES (color code) calculated by GSEA, comparing the top 10 enriched KEGG pathways in allo-BMT SLO (blue) and GVHD TO (red) groups. Pathways in common with the B6→129 BMT model are highlighted in bold. (D) F→M BMT + T cell recipients were treated with daily intraperitoneal FTY720 or PBS from day 3 onwards (n = 3, each group). Top: Representative plots of whole-blood staining for Thy-1.2 and CD19 at day 7 after transplant in FTY720- and PBS-treated BMT recipients. Bottom: MDS plot showing the proximity of transcriptional profiles of naive input T cells and donor-derived CD8+ T cells from the LNs at day 3, and at day 7 with or without FTY720-mediated prevention of TE egress to the periphery. (E) Top: sorting strategy of peripheral blood T cells (right panel; green gates). Bottom: MDS plot showing similarity of the transcriptional profiles of donor-derived CD8+ T cells isolated from the GVHD target organs (gut and skin) and from their respective draining LNs, and GVHD target organ–tropic peripheral blood subsets. (F) Representation of Tc1 and Tc17 gene signature expression in each sample, evaluated by single-sample GSEA. BCAA, branched-chain amino acid; BM, bone marrow; BMT, BM transplantation; Der, dermis; D+, number of days after BMT; Epi, epidermis; FDR, false discovery rate; GSEA, gene set enrichment analysis; GVHD, graft-versus-host disease; IEL, intraepithelial lymphocyte; LN, lymph node; LP, lamina propria; MDS, multidimensional scaling; MLN, mesenteric LN; NES, normalized enrichment score; PLN, peripheral LN; SI, small intestine; SLO, secondary lymphoid organ; Sk, skin; TE, effector T cell; TO, target organ.

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