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NKG2C and NKG2A coexpression defines a highly functional antiviral NK population in spontaneous HIV control
Nerea Sánchez-Gaona, Ana Gallego-Cortés, Antonio Astorga-Gamaza, Norma Rallón, José Miguel Benito, Ezequiel Ruiz-Mateos, Adrian Curran, Joaquin Burgos, Jordi Navarro, Paula Suanzes, Vicenç Falcó, Meritxell Genescà, Maria J. Buzon
Nerea Sánchez-Gaona, Ana Gallego-Cortés, Antonio Astorga-Gamaza, Norma Rallón, José Miguel Benito, Ezequiel Ruiz-Mateos, Adrian Curran, Joaquin Burgos, Jordi Navarro, Paula Suanzes, Vicenç Falcó, Meritxell Genescà, Maria J. Buzon
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Research Article AIDS/HIV

NKG2C and NKG2A coexpression defines a highly functional antiviral NK population in spontaneous HIV control

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Abstract

Elite controllers (ECs), a unique group of people with HIV (PWH), exhibit remarkable control of viral replication in the absence of antiretroviral therapy. In this study, we comprehensively characterized the NK cell repertoire in ECs after long-term viral control. Phenotypic profiling of NK cells revealed profound differences compared with other PWH, but marked similarities to uninfected individuals, with a distinctive prevalence of NKG2C+CD57+ memory-like NK cells. Functional analyses indicated that ECs had limited production of functional molecules upon NK stimulation and consequently reduced natural cytotoxicity against non-HIV target cells. Importantly, ECs showed an exceptional ability to kill primary HIV-infected cells by the antibody-dependent cell cytotoxicity adaptive mechanism, which was achieved by a specific memory-like NK population expressing CD16, NKG2A, NKG2C, CD57, and CXCR3. In-depth single-cell RNA-seq unveiled a unique transcriptional signature in these NK cells linked to increased cell metabolism, migration, chemotaxis, effector functions, cytokine secretion, and antiviral response. Our findings underscore a pivotal role of NK cells in the immune control of HIV and identify specific NK cells as emerging targets for immunotherapies.

Authors

Nerea Sánchez-Gaona, Ana Gallego-Cortés, Antonio Astorga-Gamaza, Norma Rallón, José Miguel Benito, Ezequiel Ruiz-Mateos, Adrian Curran, Joaquin Burgos, Jordi Navarro, Paula Suanzes, Vicenç Falcó, Meritxell Genescà, Maria J. Buzon

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Figure 2

Functional profile of NK cells in ECs.

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Functional profile of NK cells in ECs.
NK cell activation and cytotoxici...
NK cell activation and cytotoxicity subsequent to stimulation were evaluated by study group. The percentages of (A) IFN-γ+, (B) CD107a+, and (C) polyfunctional IFN-γ+CD107a+ within the CD56+ NK cell population were determined in basal conditions, following coculture with K562 target cells, and with additional IL-15 stimulation. Similarly, these metrics were quantified in expanded memory-like NKG2C+CD57+ NK cells (frequency >5%): the percentages of (D) IFN-γ+, (E), CD107a+, and (F) polyfunctional IFN-γ+CD107a+ NK cells after stimulation were evaluated. (G) Violin plots depicting the natural cytotoxicity exhibited by CD56+ total NK cells from the different study groups following coculture with K562 cells. (H) Spearman’s correlations between natural cytotoxic responses and the frequency of distinct NK cell subsets (left to right: CD56dimCD16hi NK cells, CD56bright NK cells, and NKG2C+CD57+ NK cells). (I) Violin plots showing the ADCC activity mediated by CD56+ total NK cells against HIV-expressing cells by study group. (J) Spearman’s correlations between ADCC responses and the frequency of different NK cell populations (left to right: CD56dimCD16hi NK cells, CD56bright NK cells, and NKG2C+CD57+ NK cells). For violin plots, median with range is represented. *P < 0.05; **P < 0.01; ***P < 0.001; ****P < 0.0001 by repeated measures 2-way ANOVA followed by Tukey’s multiple-comparison test (A–F) or Kruskal-Wallis test (G and I).

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