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TET2 promotes tumor antigen presentation and T cell IFN-γ, which is enhanced by vitamin C
Meng Cheng, … , Yue Xiong, Albert S. Baldwin
Meng Cheng, … , Yue Xiong, Albert S. Baldwin
Published October 10, 2024
Citation Information: JCI Insight. 2024;9(22):e175098. https://doi.org/10.1172/jci.insight.175098.
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Research Article Immunology Oncology

TET2 promotes tumor antigen presentation and T cell IFN-γ, which is enhanced by vitamin C

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Abstract

Immune evasion by tumors is promoted by low T cell infiltration, ineffective T cell activity directed against the tumor, and reduced tumor antigen presentation. The TET2 DNA dioxygenase gene is frequently mutated in hematopoietic malignancies and loss of TET enzymatic activity is found in a variety of solid tumors. We showed previously that vitamin C (VC), a cofactor of TET2, enhances tumor-associated T cell recruitment and checkpoint inhibitor therapy responses in a TET2-dependent manner. Using single-cell RNA sequencing (scRNA-seq) analysis performed on B16-OVA melanoma tumors, we have shown here that an additional function for TET2 in tumors is to promote expression of certain antigen presentation machinery genes, which is potently enhanced by VC. Consistently, VC promoted antigen presentation in cell-based and tumor assays in a TET2-dependent manner. Quantifying intercellular signaling from the scRNA-seq dataset showed that T cell–derived IFN-γ–induced signaling within the tumor and tumor microenvironment requires tumor-associated TET2 expression, which is enhanced by VC treatment. Analysis of patient tumor samples indicated that TET activity directly correlates with antigen presentation gene expression and with patient outcomes. Our results demonstrate the importance of tumor-associated TET2 activity as a critical mediator of tumor immunity, which is augmented by high-dose VC therapy.

Authors

Meng Cheng, Angel Ka Yan Chu, Zhijun Li, Shiyue Yang, Matthew D. Smith, Qi Zhang, Nicholas G. Brown, William F. Marzluff, Nabeel Bardeesy, J. Justin Milner, Joshua D. Welch, Yue Xiong, Albert S. Baldwin

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Figure 2

scRNA-seq reveals enhanced antigen presentation processes after VC treatment in WT, but not TET2-KO, B16-OVA syngeneic tumor tissue.

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scRNA-seq reveals enhanced antigen presentation processes after VC treat...
(A) UMAP clustering from the total population of WT or TET2-KO B16-OVA treated with PBS or i.v. 1 g/kg VC groups (3 replicates per group with approximately 10,000 single cells per sample were sequenced for all 4 groups) was summarized and a total of 20 different clusters were identified, including myeloid-derived suppressor cell (MDSC), dendritic cell (DC), macrophage (Mφ), T cell, and fibroblast (FB) cell defined by their marker gene expression. (B) Population changes after VC treatment for each cluster were summarized in the bar plot. The relative abundance of each cluster was calculated by their ratio in that sample divided by the corresponding PBS control group. The top 20 most significantly enriched cellular processes based on GO analysis of the top 100 DEGs after VC treatment in the WT group (C) or TET2-KO groups (D) in the whole tumor tissue were summarized and antigen presentation processes are marked in red. Horizontal axes in C and D show the qscore.

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