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Tregs from human blood differentiate into nonlymphoid tissue–resident effector cells upon TNFR2 costimulation
Mark Mensink, Lotte J. Verleng, Ellen Schrama, George M.C. Janssen, Rayman T.N. Tjokrodirijo, Peter A. van Veelen, Qinyue Jiang, M. Fernanda Pascutti, Marie-Louise van der Hoorn, Michael Eikmans, Sander de Kivit, Jannie Borst
Mark Mensink, Lotte J. Verleng, Ellen Schrama, George M.C. Janssen, Rayman T.N. Tjokrodirijo, Peter A. van Veelen, Qinyue Jiang, M. Fernanda Pascutti, Marie-Louise van der Hoorn, Michael Eikmans, Sander de Kivit, Jannie Borst
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Research Article Immunology

Tregs from human blood differentiate into nonlymphoid tissue–resident effector cells upon TNFR2 costimulation

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Abstract

Tregs can facilitate transplant tolerance and attenuate autoimmune and inflammatory diseases. Therefore, it is clinically relevant to stimulate Treg expansion and function in vivo and to create therapeutic Treg products in vitro. We report that TNF receptor 2 (TNFR2) is a unique costimulus for naive, thymus-derived Tregs (tTregs) from human blood that promotes their differentiation into nonlymphoid tissue–resident (NLT-resident) effector Tregs, without Th-like polarization. In contrast, CD28 costimulation maintains a lymphoid tissue–resident (LT-resident) Treg phenotype. We base this conclusion on transcriptome and proteome analysis of TNFR2- and CD28-costimulated CD4+ tTregs and conventional T cells (Tconvs), followed by bioinformatic comparison with published transcriptomic Treg signatures from NLT and LT in health and disease, including autoimmunity and cancer. These analyses illuminate that TNFR2 costimulation promoted tTreg capacity for survival, migration, immunosuppression, and tissue regeneration. Functional studies confirmed improved migratory ability of TNFR2-costimulated tTregs. Flow cytometry validated the presence of the TNFR2-driven tTreg signature in effector/memory Tregs from the human placenta, as opposed to blood. Thus, TNFR2 can be exploited as a driver of NLT-resident tTreg differentiation for adoptive cell therapy or antibody-based immunomodulation in human disease.

Authors

Mark Mensink, Lotte J. Verleng, Ellen Schrama, George M.C. Janssen, Rayman T.N. Tjokrodirijo, Peter A. van Veelen, Qinyue Jiang, M. Fernanda Pascutti, Marie-Louise van der Hoorn, Michael Eikmans, Sander de Kivit, Jannie Borst

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Figure 3

CD28 and TNFR2 costimulation differentially affect biological processes in tTregs.

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CD28 and TNFR2 costimulation differentially affect biological processes ...
(A) Heatmap showing 1,229 genes differentially expressed between TNFR2- and CD28-costimulated tTregs, based on transcriptome analysis outlined in Figure 1 (FDR < 0.05). (B) Overrepresentation network classifying differentially expressed genes into functional categories (enrichment factor > 1.5, P < 0.01). Nodes represent biological process terms from GO or Reactome. Highly connected terms were grouped, colored, and annotated manually by a shared term. (C) Upregulated cellular functions in TNFR2- versus CD28-costimulated tTregs according to IPA of the same transcriptomics data (FDR < 0.05). (D) GSEA using proteins upregulated according to proteome analysis in preexpanded tTregs after 24 hours of restimulation by anti-CD3 mAb and TNFR2 versus CD28 costimulation (P < 0.05, 1.25-fold change). Enrichment is shown in the transcriptome of tTregs costimulated via TNFR2 for 7 days (FDR < 0.05). (E) Heatmap showing similar changes in cellular processes across multiple omics analyses according to IPA. Comparative analysis includes transcriptomics data outlined in A (Transcriptomics day 7, αCD3/TNFR2 versus αCD3/CD28; FDR < 0.05), published transcriptomics data from preexpanded tTregs restimulated for 24 hours (Transcriptomics 24 hours, αCD3/TNFR2 versus αCD3; FDR < 0.05) (22, 23), and proteomic data from restimulated tTregs (Proteomics 24 hours, αCD3/TNFR2 versus αCD3/CD28; P < 0.05, 1.1-fold change). Z scores are color coded.

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