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Tubular CPT1A deletion minimally affects aging and chronic kidney injury
Safaa Hammoud, Alla Ivanova, Yosuke Osaki, Steven Funk, Haichun Yang, Olga Viquez, Rachel Delgado, Dongliang Lu, Melanie Phillips Mignemi, Jane Tonello, Selene Colon, Louise Lantier, David H. Wasserman, Benjamin D. Humphreys, Jeffrey Koenitzer, Justin Kern, Mark de Caestecker, Toren Finkel, Agnes Fogo, Nidia Messias, Irfan J. Lodhi, Leslie S. Gewin
Safaa Hammoud, Alla Ivanova, Yosuke Osaki, Steven Funk, Haichun Yang, Olga Viquez, Rachel Delgado, Dongliang Lu, Melanie Phillips Mignemi, Jane Tonello, Selene Colon, Louise Lantier, David H. Wasserman, Benjamin D. Humphreys, Jeffrey Koenitzer, Justin Kern, Mark de Caestecker, Toren Finkel, Agnes Fogo, Nidia Messias, Irfan J. Lodhi, Leslie S. Gewin
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Research Article Metabolism Nephrology

Tubular CPT1A deletion minimally affects aging and chronic kidney injury

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Abstract

Kidney tubules use fatty acid oxidation (FAO) to support their high energetic requirements. Carnitine palmitoyltransferase 1A (CPT1A) is the rate-limiting enzyme for FAO, and it is necessary to transport long-chain fatty acids into mitochondria. To define the role of tubular CPT1A in aging and injury, we generated mice with tubule-specific deletion of Cpt1a (Cpt1aCKO mice), and the mice were either aged for 2 years or injured by aristolochic acid or unilateral ureteral obstruction. Surprisingly, Cpt1aCKO mice had no significant differences in kidney function or fibrosis compared with wild-type mice after aging or chronic injury. Primary tubule cells from aged Cpt1aCKO mice had a modest decrease in palmitate oxidation but retained the ability to metabolize long-chain fatty acids. Very-long-chain fatty acids, exclusively oxidized by peroxisomes, were reduced in kidneys lacking tubular CPT1A, consistent with increased peroxisomal activity. Single-nuclear RNA-Seq showed significantly increased expression of peroxisomal FAO enzymes in proximal tubules of mice lacking tubular CPT1A. These data suggest that peroxisomal FAO may compensate in the absence of CPT1A, and future genetic studies are needed to confirm the role of peroxisomal β-oxidation when mitochondrial FAO is impaired.

Authors

Safaa Hammoud, Alla Ivanova, Yosuke Osaki, Steven Funk, Haichun Yang, Olga Viquez, Rachel Delgado, Dongliang Lu, Melanie Phillips Mignemi, Jane Tonello, Selene Colon, Louise Lantier, David H. Wasserman, Benjamin D. Humphreys, Jeffrey Koenitzer, Justin Kern, Mark de Caestecker, Toren Finkel, Agnes Fogo, Nidia Messias, Irfan J. Lodhi, Leslie S. Gewin

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Figure 9

Peroxisomes likely compensate to metabolize LCFA in absence of CPT1A.

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Peroxisomes likely compensate to metabolize LCFA in absence of CPT1A.
CP...
CPT1A and ACOX1 regulate β-oxidation of LCFA and VLFCA, respectively, in mitochondria and peroxisomes. Schematic of how peroxisomes may compensate to metabolize LCFA through ACOX1 in the absence of CPT1A (A). (B) Total levels of VLCFA (≥22 carbons) and individual VLCFA (C) were analyzed using mass spectroscopy in kidney tissue from Cpt1aCKO mice and floxed controls (n = 4–5). Data are shown as the mean ± SD. *P < 0.05. Statistical significance between the 2 genotypes was determined by unpaired t test. UMAP projection of cell types derived from single-nucleus RNA-Seq of cortical kidney tissues isolated from 3-month-old Cpt1afl/fl (n = 2) and Cpt1aCKO (n = 3) mice (D). A dot plot exhibiting expression levels of known, cell-type-specific marker genes and the percentage of cells in each cluster expressing cell-type-specific marker genes (E). Violin plots of peroxisomal genes significantly upregulated in segments of the proximal tubule with adjusted P values (*P < 0.01, **P < 1 × 10–10, ***P < 1 × 10–20; see Table 1 for specific P values and fold changes) (F). ABCD3 is a key transporter for importing VLCFA and LCFA into peroxisomes, and ACOX1 and EHHADH are enzymes involved in the first and second steps of peroxisomal FAO, respectively (G). Immunohistochemistry of EHHADH (H) and quantification (I) of young murine kidneys from Cpt1afl/fl and Cpt1aCKO mice. Scale bar: 50 μm. VLCFA, very long-chain fatty acid; LCFA, long-chain fatty acid; ACOX1, acyl-CoA oxidase 1; TCA, tricarboxylic acid; PCT-S1, proximal tubule, segment S1; PCT-S2, proximal tubule, segment S2; EHHADH, enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase.

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