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Emergence of dysfunctional neutrophils with a defect in arginase-1 release in severe COVID-19
Amrita Dwivedi, Aisling Ui Mhaonaigh, Makala Carroll, Bahareh Khosravi, Isabella Batten, Robert Seán Ballantine, Stuart Hendricken Phelan, Laura O’Doherty, Angel Mary George, Jacklyn Sui, Heike C. Hawerkamp, Padraic G. Fallon, Elnè Noppe, Sabina Mason, Niall Conlon, Clíona Ni Cheallaigh, Conor M. Finlay, Mark A. Little, Bioresource on behalf of the St James’s and Tallaght Trinity Allied Researchers (STTAR)
Amrita Dwivedi, Aisling Ui Mhaonaigh, Makala Carroll, Bahareh Khosravi, Isabella Batten, Robert Seán Ballantine, Stuart Hendricken Phelan, Laura O’Doherty, Angel Mary George, Jacklyn Sui, Heike C. Hawerkamp, Padraic G. Fallon, Elnè Noppe, Sabina Mason, Niall Conlon, Clíona Ni Cheallaigh, Conor M. Finlay, Mark A. Little, Bioresource on behalf of the St James’s and Tallaght Trinity Allied Researchers (STTAR)
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Research Article COVID-19 Immunology

Emergence of dysfunctional neutrophils with a defect in arginase-1 release in severe COVID-19

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Abstract

Neutrophilia occurs in patients infected with SARS-CoV-2 (COVID-19) and is predictive of poor outcomes. Here, we link heterogenous neutrophil populations to disease severity in COVID-19. We identified neutrophils with features of cellular aging and immunosuppressive capacity in mild COVID-19 and features of neutrophil immaturity and activation in severe disease. The low-density neutrophil (LDN) number in circulating blood correlated with COVID-19 severity. Many of the divergent neutrophil phenotypes in COVID-19 were overrepresented in the LDN fraction and were less detectable in normal-density neutrophils. Functionally, neutrophils from patients with severe COVID-19 displayed defects in neutrophil extracellular trap formation and reactive oxygen species production. Soluble factors secreted by neutrophils from these patients inhibited T cell proliferation. Neutrophils from patients with severe COVID-19 had increased expression of arginase-1 protein, a feature that was retained in convalescent patients. Despite this increase in intracellular expression, there was a reduction in arginase-1 release by neutrophils into serum and culture supernatants. Furthermore, neutrophil-mediated T cell suppression was independent of arginase-1. Our results indicate the presence of dysfunctional, activated, and immature neutrophils in severe COVID-19.

Authors

Amrita Dwivedi, Aisling Ui Mhaonaigh, Makala Carroll, Bahareh Khosravi, Isabella Batten, Robert Seán Ballantine, Stuart Hendricken Phelan, Laura O’Doherty, Angel Mary George, Jacklyn Sui, Heike C. Hawerkamp, Padraic G. Fallon, Elnè Noppe, Sabina Mason, Niall Conlon, Clíona Ni Cheallaigh, Conor M. Finlay, Mark A. Little, Bioresource on behalf of the St James’s and Tallaght Trinity Allied Researchers (STTAR)

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Figure 4

Whole blood–defined neutrophil phenotypes associated with severe disease are enriched in the LDN fraction.

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Whole blood–defined neutrophil phenotypes associated with severe disease...
A total of 124,527 CD15+ neutrophils were concatenated from matched PBMCs and NDNs from healthy controls (HC, n = 6) and patients with mild (n = 10) and severe (n = 5) cases as in Figure 1. (A) UMAP of all samples and each fraction is shown. UMAP of healthy, mild, and severe groups within the (B) LDN and (C) NDN fractions. (D) MFI heatmap of selected surface markers projected on the UMAP shown in panel A (all samples). FlowSOM-HyperFinder–defined gating strategy was applied to matched LDN and NDN fractions from the same HC and patients with COVID-19. Fraction of (E) mature-homeostatic (HC, n = 6; mild C-19, n = 15; sev C-19, n = 7), (F) aged (HC, n = 6; mild C-19, n = 18; sev C-19, n = 8), (G) immunosuppressive (HC, n = 6; mild C-19, n = 12; sev C-19, n = 7), (H) immature (HC, n = 6; mild C-19, n = 18; sev C-19, n = 8), (I) immature-activated (HC, n = 6; mild C-19, n = 15; sev C-19, n = 7), and (J) immature-degranulated (HC, n = 6; mild C-14, n = 10; sev C-19, n = 9) neutrophil populations. Solid black dots represent individuals with steroid exposure at the time of sampling. Statistical analysis was performed using 2-way ANOVA with Tukey’s multiple comparisons test. *P < 0.05; **P < 0.01; ***P < 0.001; ****P < 0.0001. Median with IQR is shown.

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