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LSD1 promotes prostate cancer reprogramming by repressing TP53 signaling independently of its demethylase function
Anbarasu Kumaraswamy, … , Joel A. Yates, Joshi J. Alumkal
Anbarasu Kumaraswamy, … , Joel A. Yates, Joshi J. Alumkal
Published July 13, 2023
Citation Information: JCI Insight. 2023;8(15):e167440. https://doi.org/10.1172/jci.insight.167440.
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Research Article Oncology

LSD1 promotes prostate cancer reprogramming by repressing TP53 signaling independently of its demethylase function

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Abstract

Lysine-specific demethylase 1 (LSD1) is a histone demethylase that promotes stemness and cell survival in cancers such as prostate cancer. Most prostate malignancies are adenocarcinomas with luminal differentiation. However, some tumors undergo cellular reprogramming to a more lethal subset termed neuroendocrine prostate cancer (NEPC) with neuronal differentiation. The frequency of NEPC is increasing since the widespread use of potent androgen receptor signaling inhibitors. Currently, there are no effective treatments for NEPC. We previously determined that LSD1 promotes survival of prostate adenocarcinoma tumors. However, the role of LSD1 in NEPC is unknown. Here, we determined that LSD1 is highly upregulated in NEPC versus adenocarcinoma patient tumors. LSD1 suppression with RNAi or allosteric LSD1 inhibitors — but not catalytic inhibitors — reduced NEPC cell survival. RNA-Seq analysis revealed that LSD1 represses pathways linked to luminal differentiation, and TP53 was the top reactivated pathway. We confirmed that LSD1 suppressed the TP53 pathway by reducing TP53 occupancy at target genes while LSD1’s catalytic function was dispensable for this effect. Mechanistically, LSD1 inhibition disrupted LSD1-HDAC interactions, increasing histone acetylation at TP53 targets. Finally, LSD1 inhibition suppressed NEPC tumor growth in vivo. These findings suggest that blocking LSD1’s noncatalytic function may be a promising treatment strategy for NEPC.

Authors

Anbarasu Kumaraswamy, Zhi Duan, Diana Flores, Chao Zhang, Archana Sehrawat, Ya-Mei Hu, Olivia A. Swaim, Eva Rodansky, William K. Storck, Joshua A. Kuleape, Karan Bedi, Rahul Mannan, Xiao-Ming Wang, Aaron Udager, Visweswaran Ravikumar, Armand Bankhead III, Ilsa Coleman, John K. Lee, Colm Morrissey, Peter S. Nelson, Arul M. Chinnaiyan, Arvind Rao, Zheng Xia, Joel A. Yates, Joshi J. Alumkal

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Figure 5

LSD1 inhibition disrupts LSD1-HDAC interaction and increases histone acetylation at TP53 targets.

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LSD1 inhibition disrupts LSD1-HDAC interaction and increases histone ace...
(A) LNCaP–N-Myc cells were treated with 1 μM catalytic LSD1 inhibitors (GSK-LSD1 or GSK-552) or 600 nM allosteric LSD1 inhibitor (SP2509), and TP53 target gene expression was measured after 48 hours by qPCR, n = 3. (B) LNCaP–N-Myc cells stably expressing empty vector, WT LSD1, or catalytically inactive mutant LSD1 (K661A) were transfected with nontargeting control (NTC) or siRNA targeting the 3′ UTR of LSD1. The expression of TP53 targets was measured by qPCR, n = 3. (C) The indicated NEPC cells were treated with 600 nM SP2509 for 48 hours, and H3K27Ac levels were measured by Western blotting. Total histone H3 levels were used as a loading control. (D and E) The indicated NEPC cells were treated with 600 nM SP2509 for 48 hours, and LSD1-HDAC2 interactions were determined by immunoprecipitation followed by Western blotting. (F and G) LNCaP–N-Myc (F) or LASCPC-01 (G) NEPC cells were treated with DMSO vehicle or 600 nM SP2509 for 48 hours. ChIP was performed with anti-H3K27Ac antibodies. qPCR was performed to amplify promoter regions of TP53 targets (CDKN1A, CCNG1) or a negative control region (UNTR4). Enrichment by IgG control IPs in all the experiments were below 0.1% input, indicating that the enrichment observed with anti-H3K27Ac antibodies in these experiments is specific, n = 3. For A, B, F, and G, data are reported as the mean ± SD. For statistical analysis, unpaired 2-tailed Student’s t tests were performed, and P values are indicated.

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