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Mitochondrial and NAD+ metabolism predict recovery from acute kidney injury in a diverse mouse population
Jean-David Morel, … , Shannon Mullican, Johan Auwerx
Jean-David Morel, … , Shannon Mullican, Johan Auwerx
Published February 8, 2023
Citation Information: JCI Insight. 2023;8(3):e164626. https://doi.org/10.1172/jci.insight.164626.
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Research Article Nephrology

Mitochondrial and NAD+ metabolism predict recovery from acute kidney injury in a diverse mouse population

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Abstract

Acute kidney failure and chronic kidney disease are global health issues steadily rising in incidence and prevalence. Animal models on a single genetic background have so far failed to recapitulate the clinical presentation of human nephropathies. Here, we used a simple model of folic acid–induced kidney injury in 7 highly diverse mouse strains. We measured plasma and urine parameters, as well as renal histopathology and mRNA expression data, at 1, 2, and 6 weeks after injury, covering the early recovery and long-term remission. We observed an extensive strain-specific response ranging from complete resistance of the CAST/EiJ to high sensitivity of the C57BL/6J, DBA/2J, and PWK/PhJ strains. In susceptible strains, the severe early kidney injury was accompanied by the induction of mitochondrial stress response (MSR) genes and the attenuation of NAD+ synthesis pathways. This is associated with delayed healing and a prolonged inflammatory and adaptive immune response 6 weeks after insult, heralding a transition to chronic kidney disease. Through a thorough comparison of the transcriptomic response in mouse and human disease, we show that critical metabolic gene alterations were shared across species, and we highlight the PWK/PhJ strain as an emergent model of transition from acute kidney injury to chronic disease.

Authors

Jean-David Morel, Maroun Bou Sleiman, Terytty Yang Li, Giacomo von Alvensleben, Alexis M. Bachmann, Dina Hofer, Ellen Broeckx, Jing Ying Ma, Vinicius Carreira, Tao Chen, Nabil Azhar, Romer A. Gonzalez-Villalobos, Matthew Breyer, Dermot Reilly, Shannon Mullican, Johan Auwerx

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Figure 4

The transcriptional profile reveals immune cell infiltration and activation, along with an early reduction of mitochondrial gene expression in susceptible strains.

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The transcriptional profile reveals immune cell infiltration and activat...
(A) Cell type deconvolution, using the single-cell data from ref. 27. An increase in immune cell proportion, indicative of infiltration, was detected in all strains but the CAST/EiJ, while the relative number of proximal and distal tubule cells is reduced following injury. The increase in proportion of podocytes is surprising and may be an artifact. Fibroblasts were not detected and may have been mislabeled as podocytes. (B and C) Gene set enrichment analysis of differentially expressed genes. (B) Treatment versus control. (C) Strain versus the average of all other strains. FDR-corrected P values are shown (***P < 0.001, **P < 0.01, *P < 0.05). The comparison between B and C highlights that, while all strains share the same response (B), the relative difference in severity is highly predictive of the clinical outcome (C). Specifically, susceptible strains C57BL/6J and PWK/PhJ have higher induction of immune and fibrosis-related genes and higher reduction of mitochondria-related genes.

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