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Loss of ATRX promotes aggressive features of osteosarcoma with increased NF-κB signaling and integrin binding
Suzanne Bartholf DeWitt, … , Ben Alman, William C. Eward
Suzanne Bartholf DeWitt, … , Ben Alman, William C. Eward
Published September 8, 2022
Citation Information: JCI Insight. 2022;7(17):e151583. https://doi.org/10.1172/jci.insight.151583.
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Research Article Oncology

Loss of ATRX promotes aggressive features of osteosarcoma with increased NF-κB signaling and integrin binding

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Abstract

Osteosarcoma (OS) is a lethal disease with few known targeted therapies. Here, we show that decreased ATRX expression is associated with more aggressive tumor cell phenotypes, including increased growth, migration, invasion, and metastasis. These phenotypic changes correspond with activation of NF-κB signaling, extracellular matrix remodeling, increased integrin αvβ3 expression, and ETS family transcription factor binding. Here, we characterize these changes in vitro, in vivo, and in a data set of human OS patients. This increased aggression substantially sensitizes ATRX-deficient OS cells to integrin signaling inhibition. Thus, ATRX plays an important tumor-suppression role in OS, and loss of function of this gene may underlie new therapeutic vulnerabilities. The relationship between ATRX expression and integrin binding, NF-κB activation, and ETS family transcription factor binding has not been described in previous studies and may impact the pathophysiology of other diseases with ATRX loss, including other cancers and the ATR-X α thalassemia intellectual disability syndrome.

Authors

Suzanne Bartholf DeWitt, Sarah Hoskinson Plumlee, Hailey E. Brighton, Dharshan Sivaraj, E.J. Martz, Maryam Zand, Vardhman Kumar, Maya U. Sheth, Warren Floyd, Jacob V. Spruance, Nathan Hawkey, Shyni Varghese, Jianhua Ruan, David G. Kirsch, Jason A. Somarelli, Ben Alman, William C. Eward

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Figure 9

Integrin signaling is enriched in ATRX-altered tumors in the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes dataset.

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Integrin signaling is enriched in ATRX-altered tumors in the ICGC/TCGA P...
(A) Oncoprint of ATRX status. ATRX was found to be altered in 9% of 2583 samples after “hiding mutations and copy number alterations of unknown significance” in the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes dataset on cBioPortal (18, 19, 44). (B) Integrin signaling was enriched in the ATRX-altered tumors. Overrepresentation Analysis (ORA) was performed on expression data between ATRX-altered and unaltered groups (92). Genes submitted to ORA had higher expression in ATRX-altered groups than unaltered groups, and all identified genes had q < 0.05. The query was submitted to the Panther, KEGG, and Wikipathway cancer databases. Enrichment ratios for identified pathways with FDR < 0.05 are displayed. (C) Kaplan-Meier survival curve based on ATRX status. Hazard ratio = 3.917; 95% CI, 1.335–11.5; P < 0.036. Note, not all ATRX-altered tumors have deletions; aside from homdel, there are 2 missense mutations and 1 amplification represented in the altered group.

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