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Lipin 1 modulates mRNA splicing during fasting adaptation in liver
Huan Wang, Tracey W. Chan, Ajay A. Vashisht, Brian G. Drew, Anna C. Calkin, Thurl E. Harris, James A. Wohlschlegel, Xinshu Xiao, Karen Reue
Huan Wang, Tracey W. Chan, Ajay A. Vashisht, Brian G. Drew, Anna C. Calkin, Thurl E. Harris, James A. Wohlschlegel, Xinshu Xiao, Karen Reue
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Research Article Metabolism

Lipin 1 modulates mRNA splicing during fasting adaptation in liver

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Abstract

Lipin 1 regulates cellular lipid homeostasis through roles in glycerolipid synthesis (through phosphatidic acid phosphatase activity) and transcriptional coactivation. Lipin 1–deficient individuals exhibit episodic disease symptoms that are triggered by metabolic stress, such as stress caused by prolonged fasting. We sought to identify critical lipin 1 activities during fasting. We determined that lipin 1 deficiency induces widespread alternative mRNA splicing in liver during fasting, much of which is normalized by refeeding. The role of lipin 1 in mRNA splicing was largely independent of its enzymatic function. We identified interactions between lipin 1 and spliceosome proteins, as well as a requirement for lipin 1 to maintain homeostatic levels of spliceosome small nuclear RNAs and specific RNA splicing factors. In fasted Lpin1–/– liver, we identified a correspondence between alternative splicing of phospholipid biosynthetic enzymes and dysregulated phospholipid levels; splicing patterns and phospholipid levels were partly normalized by feeding. Thus, lipin 1 influences hepatic lipid metabolism through mRNA splicing, as well as through enzymatic and transcriptional activities, and fasting exacerbates the deleterious effects of lipin 1 deficiency on metabolic homeostasis.

Authors

Huan Wang, Tracey W. Chan, Ajay A. Vashisht, Brian G. Drew, Anna C. Calkin, Thurl E. Harris, James A. Wohlschlegel, Xinshu Xiao, Karen Reue

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Figure 3

Lipin1 PAP-independent activity modulates mRNA splicing.

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Lipin1 PAP-independent activity modulates mRNA splicing.
(A) Experimenta...
(A) Experimental design to assess effect of acute lipin 1 inhibition on mRNA splicing fidelity, and the requirement for lipin 1 PAP or coactivator function. Cells treated with short hairpin RNA (shRNA) directed against lipin 1 mRNA 3′-UTR were subsequently complemented with either WT lipin 1 (PAP and coactivator activity) or mutant lipin 1 (coactivator activity only). RNA splicing pattern was assessed by RT-PCR. (B) Immunoblot shows that adenoviral vector expressing shLpin1 reduces lipin1 protein levels but has negligible effect on lipin 2 protein levels in Hepa1-6 cells. LacZ, adenovirus vector expressing lacZ as a negative control. (C) Comparable protein expression levels of WT lipin 1 (Lip1) and lipin 1D679E mutant protein (Lip1DE) via cDNA transfection after treatment of cells with shLpin1. (D and E) RNA splicing following acute lipin 1 knockdown and knockdown followed by complementation with Lip1 or Lip1DE. U2af26 and Rbm5 splicing was assessed by RT-PCR (D), and splice variants quantitated by densitometry (E) (n = 3). Bars in E represent mean ± SD; bars with different letters are significantly different from one another at P < 0.05 via Tukey’s HSD post hoc comparison.

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