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Stiff matrix instigates type I collagen biogenesis by mammalian cleavage factor I complex-mediated alternative polyadenylation
Zijing Zhou, Jing Qu, Li He, Yi Zhu, Shan-Zhong Yang, Feng Zhang, Ting Guo, Hong Peng, Ping Chen, Yong Zhou
Zijing Zhou, Jing Qu, Li He, Yi Zhu, Shan-Zhong Yang, Feng Zhang, Ting Guo, Hong Peng, Ping Chen, Yong Zhou
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Research Article Pulmonology

Stiff matrix instigates type I collagen biogenesis by mammalian cleavage factor I complex-mediated alternative polyadenylation

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Abstract

Alternative polyadenylation (APA) is a widespread and important mechanism in regulation of gene expression. Dysregulation of the 3′ UTR cleavage and polyadenylation represents a common characteristic among many disease states, including lung fibrosis. In this study, we investigated the role of mammalian cleavage factor I–mediated (CFIm-mediated) APA in regulating extracellular matrix production in response to mechanical stimuli from stiffened matrix simulating the fibrotic lungs. We found that stiff matrix downregulated expression of CFIm68, CFIm59 and CFIm25 subunits and promoted APA in favor of the proximal poly(A) site usage in the 3′ UTRs of type I collagen (COL1A1) and fibronectin (FN1) in primary human lung fibroblasts. Knockdown and overexpression of each individual CFIm subunit demonstrated that CFIm68 and CFIm25 are indispensable attributes of stiff matrix–induced APA and overproduction of COL1A1, whereas CFIm did not appear to mediate stiffness-regulated FN1 APA. Furthermore, expression of the CFIm subunits was associated with matrix stiffness in vivo in a bleomycin-induced mouse model of pulmonary fibrosis. These data suggest that stiff matrix instigates type I collagen biogenesis by selectively targeting mRNA transcripts for 3′ UTR shortening. The current study uncovered a potential mechanism for regulation of the CFIm complex by mechanical cues under fibrotic conditions.

Authors

Zijing Zhou, Jing Qu, Li He, Yi Zhu, Shan-Zhong Yang, Feng Zhang, Ting Guo, Hong Peng, Ping Chen, Yong Zhou

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Figure 1

Stiff matrix inhibits expression of the CFIm subunits at the mRNA and/or protein level.

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Stiff matrix inhibits expression of the CFIm subunits at the mRNA and/or...
Primary lung fibroblasts were isolated from failed donor lungs of 3 human subjects (subj). Cells were cultured on soft and stiff polyacrylamide gels for 48 hours. (A) Relative levels of CFIm68, CFIm59, and CFIm25 mRNA were determined by real-time RT-PCR. GAPDH was used as internal reference control. Bar graphs represent (mean ± SD) 5 separate experiments. (B) Protein levels of CFIm68, CFIm59, and CFIm25 were determined by immunoblot. GAPDH was used as loading control. Densitometry was performed using ImageJ (NIH). Relative density of CFIm subunits was normalized to GAPDH. Bar graphs represent (mean ± SD) 3 separate experiments. A 2-tailed Student’s t test was used for comparison between groups.

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