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Using a barcoded AAV capsid library to select for clinically relevant gene therapy vectors
Katja Pekrun, … , Markus Grompe, Mark A. Kay
Katja Pekrun, … , Markus Grompe, Mark A. Kay
Published November 14, 2019
Citation Information: JCI Insight. 2019;4(22):e131610. https://doi.org/10.1172/jci.insight.131610.
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Resource and Technical Advance Therapeutics

Using a barcoded AAV capsid library to select for clinically relevant gene therapy vectors

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Abstract

While gene transfer using recombinant adeno-associated viral (rAAV) vectors has shown success in some clinical trials, there remain many tissues that are not well transduced. Because of the recent success in reprogramming islet-derived cells into functional β cells in animal models, we constructed 2 highly complex barcoded replication competent capsid shuffled libraries and selected for high-transducing variants on primary human islets. We describe the generation of a chimeric AAV capsid (AAV-KP1) that facilitates transduction of primary human islet cells and human embryonic stem cell–derived β cells with up to 10-fold higher efficiency compared with previously studied best-in-class AAV vectors. Remarkably, this chimeric capsid also enabled transduction of both mouse and human hepatocytes at very high levels in a humanized chimeric mouse model, thus providing a versatile vector that has the potential to be used in both preclinical testing and human clinical trials for liver-based diseases and diabetes.

Authors

Katja Pekrun, Gustavo De Alencastro, Qing-Jun Luo, Jun Liu, Youngjin Kim, Sean Nygaard, Feorillo Galivo, Feijie Zhang, Ren Song, Matthew R. Tiffany, Jianpeng Xu, Matthias Hebrok, Markus Grompe, Mark A. Kay

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Figure 2

Enrichment of distinct capsids during passaging.

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Enrichment of distinct capsids during passaging.
Barcode sequences were ...
Barcode sequences were amplified from viral genomes after each passage and were analyzed by high-throughput sequencing. Enriched variants are depicted in different colors, while all other variants are shown in gray. Enrichment of AAV capsid variants used for vectorization is indicated (10A1, 10A2, 10A3, 10A4 10A5, 18A1, 18A2).

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