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Transcriptional heterogeneity of fibroblasts is a hallmark of the aging heart
Ramon Vidal, Julian Uwe Gabriel Wagner, Caroline Braeuning, Cornelius Fischer, Ralph Patrick, Lukas Tombor, Marion Muhly-Reinholz, David John, Magdalena Kliem, Thomas Conrad, Nuno Guimarães-Camboa, Richard Harvey, Stefanie Dimmeler, Sascha Sauer
Ramon Vidal, Julian Uwe Gabriel Wagner, Caroline Braeuning, Cornelius Fischer, Ralph Patrick, Lukas Tombor, Marion Muhly-Reinholz, David John, Magdalena Kliem, Thomas Conrad, Nuno Guimarães-Camboa, Richard Harvey, Stefanie Dimmeler, Sascha Sauer
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Research Article Aging Cardiology

Transcriptional heterogeneity of fibroblasts is a hallmark of the aging heart

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Abstract

Aging is a major risk factor for cardiovascular disease. Although the impact of aging has been extensively studied, little is known regarding the aging processes in cells of the heart. Here we analyzed the transcriptomes of hearts of 12-week-old and 18-month-old mice by single-nucleus RNA-sequencing. Among all cell types, aged fibroblasts showed most significant differential gene expression, increased RNA dynamics, and network entropy. Aged fibroblasts exhibited significantly changed expression patterns of inflammatory, extracellular matrix organization angiogenesis, and osteogenic genes. Functional analyses indicated deterioration of paracrine signatures between fibroblasts and endothelial cells in old hearts. Aged heart-derived fibroblasts had impaired endothelial cell angiogenesis and autophagy and augmented proinflammatory response. In particular, expression of Serpine1 and Serpine2 were significantly increased and secreted by old fibroblasts to exert antiangiogenic effects on endothelial cells, an effect that could be significantly prevented by using neutralizing antibodies. Moreover, we found an enlarged subpopulation of aged fibroblasts expressing osteoblast genes in the epicardial layer associated with increased calcification. Taken together this study provides system-wide insights and identifies molecular changes of aging cardiac fibroblasts, which may contribute to declined heart function.

Authors

Ramon Vidal, Julian Uwe Gabriel Wagner, Caroline Braeuning, Cornelius Fischer, Ralph Patrick, Lukas Tombor, Marion Muhly-Reinholz, David John, Magdalena Kliem, Thomas Conrad, Nuno Guimarães-Camboa, Richard Harvey, Stefanie Dimmeler, Sascha Sauer

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Figure 3

Transcriptional activity in aging cardiac fibroblasts.

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Transcriptional activity in aging cardiac fibroblasts.
(A) Fibroblasts w...
(A) Fibroblasts were sorted using DDRTree algorithm and using the DEGs between old and young to define different cell development states during aging. (B) Projection of subclusters onto the different cell states. Same colors from Figure 2B were used. (C) Differences in cell numbers between old and young of all fibroblast states were calculated by comparing the normalized means. Significance was calculated by Fisher’s exact test (**P < 0.01). (D) Transcriptional activity was estimated by measuring the ratio between unspliced and spliced mRNAs. This so-called RNA velocity is represented by high-dimensional vectors; the longer the arrow in the plot, the higher the transcriptional activity as seen in the extremities of states h, j, and l plot containing mostly old cells.

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