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Transcriptional heterogeneity of fibroblasts is a hallmark of the aging heart
Ramon Vidal, … , Stefanie Dimmeler, Sascha Sauer
Ramon Vidal, … , Stefanie Dimmeler, Sascha Sauer
Published November 14, 2019
Citation Information: JCI Insight. 2019;4(22):e131092. https://doi.org/10.1172/jci.insight.131092.
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Research Article Aging Cardiology

Transcriptional heterogeneity of fibroblasts is a hallmark of the aging heart

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Abstract

Aging is a major risk factor for cardiovascular disease. Although the impact of aging has been extensively studied, little is known regarding the aging processes in cells of the heart. Here we analyzed the transcriptomes of hearts of 12-week-old and 18-month-old mice by single-nucleus RNA-sequencing. Among all cell types, aged fibroblasts showed most significant differential gene expression, increased RNA dynamics, and network entropy. Aged fibroblasts exhibited significantly changed expression patterns of inflammatory, extracellular matrix organization angiogenesis, and osteogenic genes. Functional analyses indicated deterioration of paracrine signatures between fibroblasts and endothelial cells in old hearts. Aged heart-derived fibroblasts had impaired endothelial cell angiogenesis and autophagy and augmented proinflammatory response. In particular, expression of Serpine1 and Serpine2 were significantly increased and secreted by old fibroblasts to exert antiangiogenic effects on endothelial cells, an effect that could be significantly prevented by using neutralizing antibodies. Moreover, we found an enlarged subpopulation of aged fibroblasts expressing osteoblast genes in the epicardial layer associated with increased calcification. Taken together this study provides system-wide insights and identifies molecular changes of aging cardiac fibroblasts, which may contribute to declined heart function.

Authors

Ramon Vidal, Julian Uwe Gabriel Wagner, Caroline Braeuning, Cornelius Fischer, Ralph Patrick, Lukas Tombor, Marion Muhly-Reinholz, David John, Magdalena Kliem, Thomas Conrad, Nuno Guimarães-Camboa, Richard Harvey, Stefanie Dimmeler, Sascha Sauer

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Figure 1

Cell type–specific composition of the heart in young and old mice.

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Cell type–specific composition of the heart in young and old mice.
(A) t...
(A) tSNE representation of all cells and cell clusters from all 6 samples. Clusters were annotated according to their detected gene markers. Details about each cell population can be found in Supplemental Figure 3 and Supplemental Table 2. Most cell clusters could be separated with high confidence; however, in this initial analysis, fibroblasts remained difficult to distinguish from one another. (B) A total of 128 unique differentially expressed genes (DEGs) (adjusted P < 0.1) were found between young and old samples among all detected clusters. Outer circle represents upregulated genes in old samples, and inner circle represents the downregulated genes in old. (C) GO enrichment comparison (hypergeometric test) of the DEGs between young and old samples in the cell populations with at least 1 significant result (adjusted P < 0.1). Up- and downregulated genes were analyzed together. Subpopulations were analyzed together. (D) The DEGs were grouped into coexpressed networks and represented as different colors; these networks were functionally annotated according to their genes. These genes were spatially organized in a Venn diagram for easy access of same DEGs in multiple cell types.

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