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Spatial and phenotypic immune profiling of metastatic colon cancer
Jenny Lazarus, Tomasz Maj, J. Joshua Smith, Mirna Perusina Lanfranca, Arvind Rao, Michael I. D’Angelica, Lawrence Delrosario, Alexander Girgis, Casey Schukow, Jinru Shia, Ilona Kryczek, Jiaqi Shi, Isaac Wasserman, Howard Crawford, Hari Nathan, Marina Pasca Di Magliano, Weiping Zou, Timothy L. Frankel
Jenny Lazarus, Tomasz Maj, J. Joshua Smith, Mirna Perusina Lanfranca, Arvind Rao, Michael I. D’Angelica, Lawrence Delrosario, Alexander Girgis, Casey Schukow, Jinru Shia, Ilona Kryczek, Jiaqi Shi, Isaac Wasserman, Howard Crawford, Hari Nathan, Marina Pasca Di Magliano, Weiping Zou, Timothy L. Frankel
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Research Article Immunology Oncology

Spatial and phenotypic immune profiling of metastatic colon cancer

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Abstract

Paramount to the efficacy of immune checkpoint inhibitors is proper selection of patients with adequate tumor immunogenicity and a robust but suppressed immune infiltrate. In colon cancer, immune-based therapies are approved for patients with DNA mismatch repair (MMR) deficiencies, in whom accumulation of genetic mutations results in increased neoantigen expression, triggering an immune response that is suppressed by the PD-L1/PD-1 pathway. Here, we report that characterization of the microenvironment of MMR-deficient metastatic colorectal cancer using multiplex fluorescent immunohistochemistry (mfIHC) identified increased infiltration of cytotoxic T lymphocytes (CTLs), which were more often engaged with epithelial cells (ECs) and improved overall survival. A subset of patients with intact MMR but a similar immune microenvironment to MMR-deficient patients was identified and found to universally express high levels of PD-L1, suggesting that they may represent a currently untreated, checkpoint inhibitor–responsive population. Further, PD-L1 expression on antigen-presenting cells (APCs) in the tumor microenvironment (TME) resulted in impaired CTL/EC engagement and enhanced infiltration and engagement of Tregs. Characterization of the TME by mfIHC highlights the interconnection between immunity and immunosuppression in metastatic colon cancer and may better stratify patients for receipt of immunotherapies.

Authors

Jenny Lazarus, Tomasz Maj, J. Joshua Smith, Mirna Perusina Lanfranca, Arvind Rao, Michael I. D’Angelica, Lawrence Delrosario, Alexander Girgis, Casey Schukow, Jinru Shia, Ilona Kryczek, Jiaqi Shi, Isaac Wasserman, Howard Crawford, Hari Nathan, Marina Pasca Di Magliano, Weiping Zou, Timothy L. Frankel

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Figure 2

High CD8+ T cell infiltration predicts survival following resection of colorectal liver metastases.

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High CD8+ T cell infiltration predicts survival following resection of c...
(A–E) Multiplex fluorescent immunohistochemistry (mfIHC) followed by tissue and cell segmentation allows for accurate phenotyping of cells in the tumor microenvironment (TME). (A) A multispectral merged (composite) image (original magnification, ×20) (white, tumor epithelial cell; green, helper T cell; yellow, cytotoxic T lymphocyte [CTL]; red, Tregs; orange, antigen-presenting cell [APC]; magenta, PD-L1) subjected to tissue segmentation (B), cell segmentation (C), scoring (D), and generation of phenotypes (E). (F–K) Kaplan-Meier survival curves created for high cell infiltration (upper quartile) compared with all other available patients for (F) T cells, (G) CTLs as fraction of total cells, (H) CTLs as fraction of T cells, (I) Tregs, (J) the total Treg/CTL ratio, and (K) APCs. (L and M) Correlation analysis between (L) T cells as a fraction of total cells and (M) APCs and CTLs as a fraction of total cells and APCs. Pearson correlation coefficient and P values are shown for each pair. CRLM, colorectal liver metastasis.

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