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Calpain-6 controls the fate of sarcoma stem cells by promoting autophagy and preventing senescence
Caroline Andrique, Laetitia Morardet, Laetitia K. Linares, Madi Y. Cissé, Candice Merle, Frédéric Chibon, Sylvain Provot, Eric Haÿ, Hang-Korng Ea, Martine Cohen-Solal, Dominique Modrowski
Caroline Andrique, Laetitia Morardet, Laetitia K. Linares, Madi Y. Cissé, Candice Merle, Frédéric Chibon, Sylvain Provot, Eric Haÿ, Hang-Korng Ea, Martine Cohen-Solal, Dominique Modrowski
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Research Article Oncology

Calpain-6 controls the fate of sarcoma stem cells by promoting autophagy and preventing senescence

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Abstract

Sarcomas are still unsolved therapeutic challenges. Cancer stem cells are believed to contribute to sarcoma development, but lack of specific markers prevents their characterization and targeting. Here, we show that calpain-6 expression is associated with cancer stem cell features. In mouse models of bone sarcoma, calpain-6–expressing cells have unique tumor-initiating and metastatic capacities. Calpain-6 levels are especially high in tumors that have been successfully propagated in mouse to establish patient-derived xenografts. We found that calpain-6 levels are increased by hypoxia in vitro and calpain-6 is detected within hypoxic areas in tumors. Furthermore, calpain-6 expression depends on the stem cell transcription network that involves Oct4, Nanog, and Sox2 and is activated by hypoxia. Calpain-6 knockdown blocks tumor development in mouse and induces depletion of the cancer stem cell population. Data from transcriptomic analyses reveal that calpain-6 expression in sarcomas inversely correlates with senescence markers. Calpain-6 knockdown suppresses hypoxia-dependent prevention of senescence entry and also promotion of autophagic flux. Together, our results demonstrate that calpain-6 identifies sarcoma cells with stem-like properties and is a mediator of hypoxia to prevent senescence, promote autophagy, and maintain the tumor-initiating cell population. These findings open what we believe is a novel therapeutic avenue for targeting sarcoma stem cells.

Authors

Caroline Andrique, Laetitia Morardet, Laetitia K. Linares, Madi Y. Cissé, Candice Merle, Frédéric Chibon, Sylvain Provot, Eric Haÿ, Hang-Korng Ea, Martine Cohen-Solal, Dominique Modrowski

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Figure 5

Calpain-6 knockdown inhibits tumorigenesis.

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Calpain-6 knockdown inhibits tumorigenesis.
(A and B) RT-qPCR of calpain...
(A and B) RT-qPCR of calpain-6 in control and calpain-6KD K7M2 (A) and 143B (B) cells cultured in 21% or 3% O2. Results are the mean ΔΔCT ± SD of 3 extracts from different cultures compared by 1-way ANOVA. (C and D) Mean bioluminescence intensity in control and calpain-6KD K7M2 cell–implanted (C) and control and calpain-6KD 143B cell–implanted (D) mice. n = 6 mice/group for K7M2 cell–implanted and n = 5 mice/group for 143B cell–implanted mice. Data are medians, box edges are the interquartile range, and whiskers are the range. Outliers were identified by Grubbs’ test (α = 0.05). Data were compared by multiple t test corrected by the 2-stage step-up method of Benjamini, Krieger, and Yekutieli. (E and F) Kaplan-Meier survival curves for mice implanted with K7M2 (E) and 143B (F) cells. (G) Flow cytometry of Calp-6-GFP+ cells in calpain-6KD 143B and TC71 cell populations (50,000 cells were analyzed).

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