Focused evolution of HIV-1 neutralizing antibodies revealed by structures and deep sequencing

X Wu, T Zhou, J Zhu, B Zhang, I Georgiev, C Wang… - Science, 2011 - science.org
X Wu, T Zhou, J Zhu, B Zhang, I Georgiev, C Wang, X Chen, NS Longo, M Louder, K McKee…
Science, 2011science.org
Antibody VRC01 is a human immunoglobulin that neutralizes about 90% of HIV-1 isolates.
To understand how such broadly neutralizing antibodies develop, we used x-ray
crystallography and 454 pyrosequencing to characterize additional VRC01-like antibodies
from HIV-1–infected individuals. Crystal structures revealed a convergent mode of binding
for diverse antibodies to the same CD4-binding-site epitope. A functional genomics analysis
of expressed heavy and light chains revealed common pathways of antibody-heavy chain …
Antibody VRC01 is a human immunoglobulin that neutralizes about 90% of HIV-1 isolates. To understand how such broadly neutralizing antibodies develop, we used x-ray crystallography and 454 pyrosequencing to characterize additional VRC01-like antibodies from HIV-1–infected individuals. Crystal structures revealed a convergent mode of binding for diverse antibodies to the same CD4-binding-site epitope. A functional genomics analysis of expressed heavy and light chains revealed common pathways of antibody-heavy chain maturation, confined to the IGHV1-2*02 lineage, involving dozens of somatic changes, and capable of pairing with different light chains. Broadly neutralizing HIV-1 immunity associated with VRC01-like antibodies thus involves the evolution of antibodies to a highly affinity-matured state required to recognize an invariant viral structure, with lineages defined from thousands of sequences providing a genetic roadmap of their development.
AAAS