[HTML][HTML] SARS-CoV-2-derived peptides define heterologous and COVID-19-induced T cell recognition

A Nelde, T Bilich, JS Heitmann, Y Maringer… - Nature …, 2021 - nature.com
A Nelde, T Bilich, JS Heitmann, Y Maringer, HR Salih, M Roerden, M Lübke, J Bauer, J Rieth…
Nature immunology, 2021nature.com
T cell immunity is central for the control of viral infections. To characterize T cell immunity,
but also for the development of vaccines, identification of exact viral T cell epitopes is
fundamental. Here we identify and characterize multiple dominant and subdominant SARS-
CoV-2 HLA class I and HLA-DR peptides as potential T cell epitopes in COVID-19
convalescent and unexposed individuals. SARS-CoV-2-specific peptides enabled detection
of post-infectious T cell immunity, even in seronegative convalescent individuals. Cross …
Abstract
T cell immunity is central for the control of viral infections. To characterize T cell immunity, but also for the development of vaccines, identification of exact viral T cell epitopes is fundamental. Here we identify and characterize multiple dominant and subdominant SARS-CoV-2 HLA class I and HLA-DR peptides as potential T cell epitopes in COVID-19 convalescent and unexposed individuals. SARS-CoV-2-specific peptides enabled detection of post-infectious T cell immunity, even in seronegative convalescent individuals. Cross-reactive SARS-CoV-2 peptides revealed pre-existing T cell responses in 81% of unexposed individuals and validated similarity with common cold coronaviruses, providing a functional basis for heterologous immunity in SARS-CoV-2 infection. Diversity of SARS-CoV-2 T cell responses was associated with mild symptoms of COVID-19, providing evidence that immunity requires recognition of multiple epitopes. Together, the proposed SARS-CoV-2 T cell epitopes enable identification of heterologous and post-infectious T cell immunity and facilitate development of diagnostic, preventive and therapeutic measures for COVID-19.
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