[PDF][PDF] Maturation pathway from germline to broad HIV-1 neutralizer of a CD4-mimic antibody

M Bonsignori, T Zhou, Z Sheng, L Chen, F Gao… - Cell, 2016 - cell.com
M Bonsignori, T Zhou, Z Sheng, L Chen, F Gao, MG Joyce, G Ozorowski, GY Chuang
Cell, 2016cell.com
Antibodies with ontogenies from VH 1-2 or VH 1-46-germline genes dominate the broadly
neutralizing response against the CD4-binding site (CD4bs) on HIV-1. Here, we define with
longitudinal sampling from time-of-infection the development of a VH 1-46-derived antibody
lineage that matured to neutralize 90% of HIV-1 isolates. Structures of lineage antibodies
CH235 (week 41 from time-of-infection, 18% breadth), CH235. 9 (week 152, 77%), and
CH235. 12 (week 323, 90%) demonstrated the maturing epitope to focus on the …
Summary
Antibodies with ontogenies from VH1-2 or VH1-46-germline genes dominate the broadly neutralizing response against the CD4-binding site (CD4bs) on HIV-1. Here, we define with longitudinal sampling from time-of-infection the development of a VH1-46-derived antibody lineage that matured to neutralize 90% of HIV-1 isolates. Structures of lineage antibodies CH235 (week 41 from time-of-infection, 18% breadth), CH235.9 (week 152, 77%), and CH235.12 (week 323, 90%) demonstrated the maturing epitope to focus on the conformationally invariant portion of the CD4bs. Similarities between CH235 lineage and five unrelated CD4bs lineages in epitope focusing, length-of-time to develop breadth, and extraordinary level of somatic hypermutation suggested commonalities in maturation among all CD4bs antibodies. Fortunately, the required CH235-lineage hypermutation appeared substantially guided by the intrinsic mutability of the VH1-46 gene, which closely resembled VH1-2. We integrated our CH235-lineage findings with a second broadly neutralizing lineage and HIV-1 co-evolution to suggest a vaccination strategy for inducing both lineages.
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