PAHdb: A locus‐specific knowledgebase

CR Scriver, PJ Waters, C Sarkissian, S Ryan… - Human …, 2000 - Wiley Online Library
CR Scriver, PJ Waters, C Sarkissian, S Ryan, L Prevost, D Côté, J Novak, S Teebi…
Human mutation, 2000Wiley Online Library
PAHdb is an online relational locus‐specific “mutation database”(http://www. mcgill.
ca/pahdb) for the human phenylalanine hydroxylase gene (symbol PAH) and its associated
phenotypes (protein, metabolic, clinical). When combined with associated information
(population distribution of allele, haplotype association, etc.) PAHdb functions as a
knowledgebase. From the outset, and in the absence of raw data (eg, sequence gels),
PAHdb has instead been an annotated repository of information about mutations maintained …
Abstract
PAHdb is an online relational locus‐specific “mutation database” (http://www.mcgill.ca/pahdb) for the human phenylalanine hydroxylase gene (symbol PAH) and its associated phenotypes (protein, metabolic, clinical). When combined with associated information (population distribution of allele, haplotype association, etc.) PAHdb functions as a knowledgebase. From the outset, and in the absence of raw data (e.g., sequence gels), PAHdb has instead been an annotated repository of information about mutations maintained by a team of curators. It is also disease‐oriented, being focused on a variant phenotype (hyperphenylalaninemia (HPA) and its most important form of disease, phenylketonuria (PKU)) resulting from primary dysfunction of the PAH enzyme (EC 1.14.16.1); it is “patient friendly” in that it contains information for those personally involved with HPA/PKU (MIM# 261600). PAHdb also serves its community through direct interaction. Hum Mutat 15:99–104, 2000. © 2000 Wiley‐Liss, Inc.
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