[PDF][PDF] UpSetR: an R package for the visualization of intersecting sets and their properties
JR Conway, A Lex, N Gehlenborg - Bioinformatics, 2017 - academic.oup.com
JR Conway, A Lex, N Gehlenborg
Bioinformatics, 2017•academic.oup.comAbstract Motivation Venn and Euler diagrams are a popular yet inadequate solution for
quantitative visualization of set intersections. A scalable alternative to Venn and Euler
diagrams for visualizing intersecting sets and their properties is needed. Results We
developed UpSetR, an open source R package that employs a scalable matrix-based
visualization to show intersections of sets, their size, and other properties. Availability and
implementation UpSetR is available at https://github. com/hms-dbmi/UpSetR/and released …
quantitative visualization of set intersections. A scalable alternative to Venn and Euler
diagrams for visualizing intersecting sets and their properties is needed. Results We
developed UpSetR, an open source R package that employs a scalable matrix-based
visualization to show intersections of sets, their size, and other properties. Availability and
implementation UpSetR is available at https://github. com/hms-dbmi/UpSetR/and released …
Motivation
Venn and Euler diagrams are a popular yet inadequate solution for quantitative visualization of set intersections. A scalable alternative to Venn and Euler diagrams for visualizing intersecting sets and their properties is needed.
Results
We developed UpSetR, an open source R package that employs a scalable matrix-based visualization to show intersections of sets, their size, and other properties.
Availability and implementation
UpSetR is available at https://github.com/hms-dbmi/UpSetR/ and released under the MIT License. A Shiny app is available at https://gehlenborglab.shinyapps.io/upsetr/.
Supplementary information
Supplementary data are available at Bioinformatics online.
Oxford University Press