Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software
Bioinformatics, 2011•academic.oup.com
There is a strong and growing need in the biology research community for accurate,
automated image analysis. Here, we describe CellProfiler 2.0, which has been engineered
to meet the needs of its growing user base. It is more robust and user friendly, with new
algorithms and features to facilitate high-throughput work. ImageJ plugins can now be run
within a CellProfiler pipeline. Availability and Implementation: CellProfiler 2.0 is free and
open source, available at http://www. cellprofiler. org under the GPL v. 2 license. It is …
automated image analysis. Here, we describe CellProfiler 2.0, which has been engineered
to meet the needs of its growing user base. It is more robust and user friendly, with new
algorithms and features to facilitate high-throughput work. ImageJ plugins can now be run
within a CellProfiler pipeline. Availability and Implementation: CellProfiler 2.0 is free and
open source, available at http://www. cellprofiler. org under the GPL v. 2 license. It is …
Abstract
Summary: There is a strong and growing need in the biology research community for accurate, automated image analysis. Here, we describe CellProfiler 2.0, which has been engineered to meet the needs of its growing user base. It is more robust and user friendly, with new algorithms and features to facilitate high-throughput work. ImageJ plugins can now be run within a CellProfiler pipeline.
Availability and Implementation: CellProfiler 2.0 is free and open source, available at http://www.cellprofiler.org under the GPL v. 2 license. It is available as a packaged application for Macintosh OS X and Microsoft Windows and can be compiled for Linux.
Contact: anne@broadinstitute.org
Supplementary information: Supplementary data are available at Bioinformatics online.
Oxford University Press