[PDF][PDF] Diversity of interneurons in the dorsal striatum revealed by single-cell RNA sequencing and PatchSeq

AB Muñoz-Manchado, CB Gonzales, A Zeisel… - Cell reports, 2018 - cell.com
Striatal locally projecting neurons, or interneurons, act on nearby circuits and shape
functional output to the rest of the basal ganglia. We performed single-cell RNA sequencing
of striatal cells enriching for interneurons. We find seven discrete interneuron types, six of
which are GABAergic. In addition to providing specific markers for the populations previously
described, including those expressing Sst/Npy, Th, Npy without Sst, and Chat, we identify
two small populations of cells expressing Cck with or without Vip. Surprisingly, the Pvalb …
Summary
Striatal locally projecting neurons, or interneurons, act on nearby circuits and shape functional output to the rest of the basal ganglia. We performed single-cell RNA sequencing of striatal cells enriching for interneurons. We find seven discrete interneuron types, six of which are GABAergic. In addition to providing specific markers for the populations previously described, including those expressing Sst/Npy, Th, Npy without Sst, and Chat, we identify two small populations of cells expressing Cck with or without Vip. Surprisingly, the Pvalb-expressing cells do not constitute a discrete cluster but rather are part of a larger group of cells expressing Pthlh with a spatial gradient of Pvalb expression. Using PatchSeq, we show that Pthlh cells exhibit a continuum of electrophysiological properties correlated with expression of Pvalb. Furthermore, we find significant molecular differences that correlate with differences in electrophysiological properties between Pvalb-expressing cells of the striatum and those of the cortex.
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