Among the subsets that define hematopoietic stem cells (HSCs), CD34⁻ c-kit⁺ Sca-1⁺ lineage marker⁻ (CD34⁻KSL) cells are regarded as one of the populations that have the highest enrichment of HSCs in adult mouse bone marrow. Here, we demonstrate that long-term repopulating hematopoietic stem cells (LTR-HSCs) have high expression of CD61 (integrin β₃) within the CD34⁻KSL population. Approximately 60% of CD34⁻KSL cells showed high expression of CD61. CD61^HighCD34⁻KSL populations also exhibited significantly greater properties of HSC, such as expression of HSC markers, the side population (SP) phenotype, and ability for long-term repopulation. In both SP cells and non-SP (NSP) cells, CD61^HighCD34⁻KSL cells also contained significantly more LTR-HSCs than CD61^Low/−CD34⁻KSL cells. Our results indicate that CD61 is exploitable for HSC enrichment as a supportive positive cell surface marker.