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Direct pharmacological targeting of asparagine synthetase to overcome resistance to L-asparaginase in ALL therapy
Rodney Claude, Sankalp Srivastava, Kirk A. Staschke, Carlos Mellado-Fritz, Shaoxiong Chen, Lei Liu, Minghua Zhong, Harish Kothandaraman, Nadia A. Lanman, Utpal Davé, Sandeep Batra, Jiehao Zhou, Yue Fang, Chi Zhang, Reuben Kapur, Jing Fan, Ronald C. Wek, Ji Zhang
Rodney Claude, Sankalp Srivastava, Kirk A. Staschke, Carlos Mellado-Fritz, Shaoxiong Chen, Lei Liu, Minghua Zhong, Harish Kothandaraman, Nadia A. Lanman, Utpal Davé, Sandeep Batra, Jiehao Zhou, Yue Fang, Chi Zhang, Reuben Kapur, Jing Fan, Ronald C. Wek, Ji Zhang
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Research Article Hematology Metabolism

Direct pharmacological targeting of asparagine synthetase to overcome resistance to L-asparaginase in ALL therapy

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Abstract

Acute lymphoblastic leukemia (ALL) is the most common pediatric cancer, arising from both B and T cell lineages (B-ALL and T-ALL). Current therapy exploits ALL cells’ low expression of asparagine synthetase (ASNS) by using L-asparaginase, a bacterial enzyme that depletes circulating asparagine. However, resistance can emerge through induction of ASNS, mediated in part by the amino acid stress sensor GCN2. In this study, we addressed the efficacy of L-asparaginase in combination with genetic or pharmacological inhibition of GCN2 and the ASNS inhibitor ASX-173. Using a KrasG12D-driven mouse model of T-ALL, we found that GCN2 is dispensable for leukemogenesis. However, genetic inactivation or pharmacologic inhibition of GCN2 sensitized ALL cells to asparagine depletion, correlating with impaired ASNS induction. While GCN2 targeting enhanced sensitivity to asparagine depletion, a subset of Gcn2–/– T-ALL cells retained high ASNS expression and remained resistant to L-asparaginase. Likewise, some human T-ALL cells with elevated ASNS levels were refractory to GCN2 inhibition even under asparagine-depleted conditions. When combined with L-asparaginase, ASX-173 effectively eliminated ASNShi leukemic cells in vitro and in vivo. These findings suggest that direct targeting of ASNS provides therapeutic benefit in leukemias that express high levels of ASNS and are resistant to GCN2 inhibition under asparagine-depleted conditions.

Authors

Rodney Claude, Sankalp Srivastava, Kirk A. Staschke, Carlos Mellado-Fritz, Shaoxiong Chen, Lei Liu, Minghua Zhong, Harish Kothandaraman, Nadia A. Lanman, Utpal Davé, Sandeep Batra, Jiehao Zhou, Yue Fang, Chi Zhang, Reuben Kapur, Jing Fan, Ronald C. Wek, Ji Zhang

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Figure 6

ASX-173 reduces leukemic burden in an ASNS-high ALL model when coupled with L-asparaginase.

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ASX-173 reduces leukemic burden in an ASNS-high ALL model when coupled w...
(A) Schematic illustration of tertiary transplant of leukemia cells from Gcn2+/+ mice relapsed from PEG and GCN2iB combo treatment. Lethally irradiated mice were transplanted with 1.2 × 106 CD45.2+ leukemia cells and 0.5 × 106 CD45.1+ helper bone marrow cells. ASX-173 was administered at 25 mg/kg for 5 days via oral gavage, starting on day 14 after transplantation (blue box). PEG was administered at 2.0 IU/g body weight on day 17 after transplantation. Mice were euthanized on day 23. (B) Images of representative spleen from mice euthanized on day 23 in A. (C and D) CD45.1 and CD45.2 profile of spleen and bone marrow cells measured by flow cytometry and the summary of CD45.2+ cell percentage (n = 3). (E and F) CD4+/CD8+ cell profile of CD45.2+CD3+ T cells from spleens in B and the summary of CD8+ cell percentage (n = 3). Statistical significance was determined using 2-way ANOVA. *P < 0.05; **P < 0.01; ****P < 0.0001. (G) Spleen tissues from B were subjected to IHC staining for c-MYC and H&E staining. Representative microscopy images were obtained at ×5 or ×20 magnification, as indicated. (H) Human Jurkat cells and mouse Gcn2–/– line 7 were subjected to asparagine depletion for 12 hours with or without ASX-173 (125 nM). c-MYC expression was assessed by Western blotting.

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