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Chemotherapy-induced reactive myelopoiesis promotes expansion of immunosuppressive neutrophil-like monocytes in mice and humans
Huidong Shi, Zhi-Chun Ding, Ogacheko D. Okoko, Xin Wang, George Zhou, Yan Ye, Md Yeashin Gazi, Caitlin Brandle, Lirong Pei, Rafal Pacholczyk, Catherine C. Hedrick, Locke J. Bryan, Gang Zhou
Huidong Shi, Zhi-Chun Ding, Ogacheko D. Okoko, Xin Wang, George Zhou, Yan Ye, Md Yeashin Gazi, Caitlin Brandle, Lirong Pei, Rafal Pacholczyk, Catherine C. Hedrick, Locke J. Bryan, Gang Zhou
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Research Article Immunology Oncology

Chemotherapy-induced reactive myelopoiesis promotes expansion of immunosuppressive neutrophil-like monocytes in mice and humans

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Abstract

Cytotoxic chemotherapy primarily targets rapidly proliferating cancer cells but also depletes normal myeloid cells. The resulting cell loss triggers reactive myelopoiesis, a compensatory process in which hematopoietic stem and progenitor cells in the bone marrow (BM) regenerate myeloid lineages. We previously showed that the alkylating agent cyclophosphamide (CTX) induces myelopoiesis, leading to the expansion of immunosuppressive monocytes in mice. However, the molecular features and clinical relevance of these cells remain poorly understood. Here, we report the emergence of immunosuppressive monocytes in the peripheral blood of lymphoma patients receiving CTX-containing chemotherapy. To gain mechanistic insight into CTX-induced myelopoiesis, we performed single-cell RNA sequencing (scRNA-seq) and assay for transposase-accessible chromatin using sequencing (ATAC-seq) on BM monocytes from CTX-treated mice. These analyses revealed a heterogeneous monocyte population and demonstrated that CTX skews myelopoiesis toward the generation of neutrophil-like monocytes (NeuMo). Moreover, CTX-induced NeuMo cells, enriched within the CXCR4+CX3CR1– monocyte subset, exhibited potent T cell–suppressive activity. Using the NeuMo gene signature, reanalysis of public scRNA-seq datasets identified a transcriptionally similar monocyte subset in chemotherapy-treated cancer patients. Collectively, our findings suggest that the expansion of NeuMo cells following chemotherapy represents a conserved immunoregulatory feedback mechanism with potential impact on tumor response to chemoimmunotherapy.

Authors

Huidong Shi, Zhi-Chun Ding, Ogacheko D. Okoko, Xin Wang, George Zhou, Yan Ye, Md Yeashin Gazi, Caitlin Brandle, Lirong Pei, Rafal Pacholczyk, Catherine C. Hedrick, Locke J. Bryan, Gang Zhou

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Figure 7

Reanalysis of publicly available scRNA-seq datasets identifies NeuMo-like cells emerging after chemotherapy in the PBMCs of cancer patients.

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Reanalysis of publicly available scRNA-seq datasets identifies NeuMo-lik...
(A) UMAP plot of 18,656 monocytes extracted from 2 publicly available scRNA-seq datasets of cancer patients, with cells colored by sample origin. (B) UMAP plot showing the same cells colored by chemotherapy treatment status. (C) Volcano plot displaying differentially expressed genes between pre- and post-chemotherapy monocytes. Differential gene expression analysis was performed using the MAST test implemented in Seurat, and P values were adjusted for multiple testing using the Bonferroni method. (D) UMAP clustering identifies 4 distinct monocyte subtypes, including classical (CD14+) and non-classical (CD16+) monocytes and 2 smaller clusters impacted by chemotherapy treatment. (E) Bar plot representing the proportions of each monocyte cluster in pre- and post-chemotherapy samples. (F) Violin plots showing expression of marker genes used to define the clusters in D. (G) Dot plot showing the expression of selected NeuMo-associated genes identified from mouse scRNA-seq datasets across the human monocyte subclusters, highlighting increased expression in cluster 3 cells following chemotherapy. (H) UMAP plot depicting the inferred cell cycle phase (G1, S, or G2/M) of each cell, with accompanying pie charts summarizing the distribution of cell cycle phases within each of the 4 monocyte clusters.

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