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Extracellular matrix alterations in chronic ischemic cardiomyopathy revealed by quantitative proteomics
Kevin M. Buck, Holden T. Rogers, Zachery R. Gregorich, Morgan W. Mann, Timothy J. Aballo, Zhan Gao, Emily A. Chapman, Andrew J. Perciaccante, Scott J. Price, Ienglam Lei, Paul C. Tang, Ying Ge
Kevin M. Buck, Holden T. Rogers, Zachery R. Gregorich, Morgan W. Mann, Timothy J. Aballo, Zhan Gao, Emily A. Chapman, Andrew J. Perciaccante, Scott J. Price, Ienglam Lei, Paul C. Tang, Ying Ge
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Research Article Cardiology Genetics

Extracellular matrix alterations in chronic ischemic cardiomyopathy revealed by quantitative proteomics

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Abstract

Ischemic cardiomyopathy (ICM) is a leading cause of heart failure characterized by extensive remodeling of the cardiac extracellular matrix (ECM). While initially adaptive, ECM deposition following ischemic injury eventually turns maladaptive, promoting adverse cardiac remodeling. The strong link between the extent of fibrosis and adverse clinical outcomes has led to growing interest in ECM-targeted therapies to prevent or reverse maladaptive cardiac remodeling in ICM; yet, the precise composition of the ECM in ICM remains poorly defined. In this study, we employed sequential protein extraction enabled by the photocleavable surfactant Azo to enrich ECM proteins from left ventricular tissues of patients with end-stage ICM and nonfailing donor hearts. High-resolution mass spectrometry–based quantitative proteomics identified and quantified over 6,000 unique protein groups, including 315 ECM proteins. We discovered significant upregulation of key ECM components, particularly glycoproteins, proteoglycans, collagens, and ECM regulators. Notably, LOXL1, FBLN1, and VCAN were among the most differentially expressed. Functional enrichment analyses revealed enhanced TGFB signaling, integrin-mediated adhesion, and complement activation in ICM tissues, suggesting a feedback loop driving continued ECM deposition in the end-stage failing heart. Together, our findings provide a comprehensive proteomic landscape of ECM alterations in the end-stage ICM myocardium and identify promising molecular targets for therapeutic intervention.

Authors

Kevin M. Buck, Holden T. Rogers, Zachery R. Gregorich, Morgan W. Mann, Timothy J. Aballo, Zhan Gao, Emily A. Chapman, Andrew J. Perciaccante, Scott J. Price, Ienglam Lei, Paul C. Tang, Ying Ge

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Figure 5

Bidirectional communication between ECM and cardiomyocytes contributes to ICM.

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Bidirectional communication between ECM and cardiomyocytes contributes t...
(A) A general scheme for interaction between ECM and cardiomyocyte contractile machinery is shown. At the sarcolemma, integrins and other costameric proteins transmit forces from ECM to cytoskeleton and then to sarcomere. DGC, dystrophin glycoprotein complex. (B) Depiction of significantly altered protein groups from our data and the corresponding protein-protein interactions plotted in Cytoscape (93). (C) Heatmap and box plots of specific protein groups, demonstrating increased expression of ECM consistent with fibrosis and changes to intracellular components of cardiomyocytes, including fermitins, actinins, and myosin heavy-chain isoforms. For the box plots, ITGB2, FERMT3, MYH6, and MYH10 are plotted from the Azo extract, while PARVB, ITGB1BP2, TPM2, and MYOM2 are plotted from the LiCl extract. Box plots show the interquartile range, median (line), and minimum and maximum (whiskers). Significance testing was performed using limma. Then P values were adjusted by independent hypothesis weighting and plotted as follows: * ≤ 0.05, ** ≤ 0.01, *** ≤ 0.001.

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