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Neural crest cell signatures drive tumorigenesis in tuberous sclerosis complex and lymphangioleiomyomatosis
Uchenna J. Unachukwu, Enio B. Garcia, Nooralam Rai, Jeanine M. D’Armiento
Uchenna J. Unachukwu, Enio B. Garcia, Nooralam Rai, Jeanine M. D’Armiento
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Research Article Cell biology Clinical Research Oncology

Neural crest cell signatures drive tumorigenesis in tuberous sclerosis complex and lymphangioleiomyomatosis

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Abstract

Tuberous sclerosis complex (TSC) and lymphangioleiomyomatosis (LAM) lack well-defined cellular origins, limiting treatment options. In this report, scRNA-seq of Tsc2+/– mouse renal cystadenomas revealed an 80-fold increase in a tumor cell subpopulation with neural crest features, expressing known cranial neural crest genes as SRY box transcription factor 9 (Sox9), transcription factor activator protein (Tfap2a), and candidate neurocristopathy markers, osteopontin (Spp1), lipocalin-2 (Lcn2), clusterin (Clu), and cytokeratin 18 (Krt18). These signatures were validated in mouse tumors and LAM patient lesions and serum, identifying a tumor phenotype distinct from traditional VEGFD detection. Pathway analysis indicated activation of WNT/SHH signaling, nephric duct formation, and protumorigenic signals, with transcription factor 7 (Tcf7) and ephrin-A ligands as key upstream regulators. Spp1 KO in cranial neural crest cells (CNCCs) significantly reduced proliferation (28%–33%), migration (54%–76%), and invasion (29%–64%) without affecting viability, while Tsc2 KO increased viability 3- to 6-fold with minimal effect on chemotaxis. Elevated serum levels of SPP1 and KRT18 in 1 subset of patients with LAM, decreased LCN2 in nearly all cases, and distinct increases in VEGFD in a separate subset suggest complementary roles for these biomarkers. Overall, findings support a neurocristopathic model of tumor development in TSC and LAM and identify potential biomarkers and therapeutic targets beyond mTOR inhibition.

Authors

Uchenna J. Unachukwu, Enio B. Garcia, Nooralam Rai, Jeanine M. D’Armiento

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Figure 9

Evidence of neurocristopathy in LAM pulmonary neoplasms (SOX9 and p-S6K).

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Evidence of neurocristopathy in LAM pulmonary neoplasms (SOX9 and p-S6K)...
(A–D) Healthy lungs lack SOX9 but minimally express phospho-p70S6Kinase (T389) (p-S6K), an indicator of mTOR pathway activation. (E–H) SOX9 localizes to the apical membrane and cilia in E202’s LAM lung with widespread p-S6K overexpression. (I–L) E209 LAM lungs similarly coexpress both markers but show less active mTORC1. Double immunolocalization results for SOX9 and p-S6K in patients E204 and E208 are provided in Supplemental Figure 8. The E209 LAM lung parenchyma field shown in panel 9I is identical to that in Figure 6A and was reused here to illustrate double-label IHC for SOX9 and p-S6K. Independent sections from all 4 patients with LAM showed comparable SOX9/p-S6K colocalization patterns (Supplemental Figure 8). (M–P) Comparative KRT18/SOX9 double immunolabeling in an age-matched IPF lung. The boxed region in H is magnified in the adjacent panel. Control tissue slides are shown in Supplemental Figure 15. Hoechst 33342 served as a nuclear counterstain. Scale bars: 20 μm (magnified images), 50 μm (A–P). Images were captured using a Nikon TiE Eclipse confocal microscope.

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