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UHRF1 deficiency exacerbates intestinal inflammation by epigenetic modulation of NPY1R gene methylation
Yanan Han, Lina Sun, Yanxing Liu, Xiaohui Zhang, Hao Liu, Haohao Zhang, Xiaoxia Ren, Fenfan Wang, Huafeng Fan, Jie Chen, Dan Liu, Daiming Fan, Yuanyuan Lu, Xue Bai, Ying Fang, Kaichun Wu, Xiaodi Zhao
Yanan Han, Lina Sun, Yanxing Liu, Xiaohui Zhang, Hao Liu, Haohao Zhang, Xiaoxia Ren, Fenfan Wang, Huafeng Fan, Jie Chen, Dan Liu, Daiming Fan, Yuanyuan Lu, Xue Bai, Ying Fang, Kaichun Wu, Xiaodi Zhao
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Research Article Gastroenterology Inflammation

UHRF1 deficiency exacerbates intestinal inflammation by epigenetic modulation of NPY1R gene methylation

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Abstract

Epigenetic modifications play a crucial role in the pathogenesis of inflammatory bowel disease (IBD) by mediating gene-environment interactions. We previously showed that UHRF1, a central regulator of DNA methylation, contributes to cancer progression; however, its function in IBD remains poorly understood. Here, we revealed that UHRF1 was frequently reduced in inflamed tissues of patients with IBD and that its deficiency exacerbated intestinal epithelial cell (IEC) damage. Through a multilevel approach incorporating human cell models and an intestinal epithelial-specific Uhrf1-KO mouse model, we established UHRF1 as a key mitigator of IBD progression. Mechanistically, UHRF1 bound to the NPY1R promoter, promoted its methylation, and led to transcriptional suppression. The NPY1R upregulation resulting from UHRF1 deficiency attenuated cAMP/PKA/CREB signaling in IECs, thereby enhancing NF-κB activation and subsequent proinflammatory responses, which compromised intestinal epithelial barrier integrity. Furthermore, we identified miR-141 as a negative regulator of NPY1R, highlighting its potential as a therapeutic agent. Collectively, our results identified the UHRF1/NPY1R regulatory axis as a critical epigenetic mechanism in intestinal inflammation and underscored its dual promise for IBD diagnostics and therapy.

Authors

Yanan Han, Lina Sun, Yanxing Liu, Xiaohui Zhang, Hao Liu, Haohao Zhang, Xiaoxia Ren, Fenfan Wang, Huafeng Fan, Jie Chen, Dan Liu, Daiming Fan, Yuanyuan Lu, Xue Bai, Ying Fang, Kaichun Wu, Xiaodi Zhao

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Figure 5

The UHRF1/NPY1R axis protects IECs via CREB activation and NF-κB suppression.

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The UHRF1/NPY1R axis protects IECs via CREB activation and NF-κB suppres...
(A) Immunoblotting and quantification of phosphoproteins in NCM460 cells transfected with siNPY1R or siCtrl. (B) Levels of CREB and p-CREB in NCM460 cells after manipulation of NPY1R. (C) Levels of the indicated proteins in UHRF1-overexpressing NCM460 cells with or without concurrent NPY1R overexpression. (D) Levels of the indicated proteins in NCM460 cells transfected with siNPY1R or siCtrl and treated with or without KG501. (E) Levels of NPY1R, CREB, and p-CREB in NCM460 cells transfected with siNPY1R or siCtrl and treated with the indicated inhibitors. (F) cAMP concentration in NCM460 cells transfected with NPY1R-overexpressing (NPY1R) or negative control (NC) vector by ELISA. (G) Levels of NPY1R, PKA, and p-PKA in NCM460 cells transfected with NPY1R or NC vector. (H) Relative luciferase activity in NCM460 cells transfected with siUHRF1, siNPY1R, or siCtrl and treated with or without DSS, LPS, or TNF-α. (I) Immunoblotting and quantification of cytokines in NCM460 cells transfected with siUHRF1 or siCtrl. (J) mRNA expression of IL-6 and IL-8 in NCM460 and FHC cells infected with shUHRF1 or shCtrl. (K) mRNA expression of IL-6 and IL-8 in NCM460 and FHC cells infected with UHRF1 or Ctrl. (L) mRNA expression of IL-6 and IL-8 in NCM460 cells with or without NPY1R and/or UHRF1 overexpression. (M) mRNA expression of IL-6 and IL-8 in NCM460 cells treated with NPY, transfected with NPY1R-overexpressing plasmid, or transfected with the plasmid and treated with NPY. (N) mRNA expression of IL-6 and IL-8 measured by qPCR in NCM460 cells transfected with siNPY1R or siCtrl and treated with or without KG501. P values were determined by 2-tailed Student’s t tests (F and K) or 1-way ANOVA (H, J, and L–N). Data are shown as mean ± SD. *P < 0.05, **P < 0.01.

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