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Variation in HIV-1 Tat activity is a key determinant in the establishment of latent infection
Francisco Gomez-Rivera, … , Marianne E. Yaple-Maresh, Kathleen L. Collins
Francisco Gomez-Rivera, … , Marianne E. Yaple-Maresh, Kathleen L. Collins
Published December 5, 2024
Citation Information: JCI Insight. 2025;10(2):e184711. https://doi.org/10.1172/jci.insight.184711.
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Research Article Infectious disease Virology

Variation in HIV-1 Tat activity is a key determinant in the establishment of latent infection

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Abstract

Despite effective treatment, human immunodeficiency virus (HIV) persists in optimally treated people as a transcriptionally silent provirus. Latently infected cells evade the immune system and the harmful effects of the virus, thereby creating a long-lasting reservoir of HIV. To gain a deeper insight into the molecular mechanisms of HIV latency establishment, we constructed a series of HIV-1 fluorescent reporter viruses that distinguish active versus latent infection. We unexpectedly observed that the proportion of active to latent infection depended on a limiting viral factor, which created a bottleneck that could be overcome by superinfection of the cell, T cell activation, or overexpression of HIV-1 transactivator of transcription (Tat). In addition, we found that tat and regulator of expression of virion proteins (Rev) expression levels varied among HIV molecular clones and that tat levels were an important variable in latency establishment. Lower rev levels limited viral protein expression whereas lower Tat levels or mutation of the Tat binding element promoted latent infection that was resistant to reactivation even in fully activated primary T cells. Nevertheless, we found that combinations of latency reversal agents targeting both cellular activation and histone acetylation pathways overcame deficiencies in the Tat/TAR axis of transcription regulation. These results provide additional insight into the mechanisms of latency establishment and inform Tat-centered approaches to cure HIV.

Authors

Francisco Gomez-Rivera, Valeri H. Terry, Cuie Chen, Mark M. Painter, Maria C. Virgilio, Marianne E. Yaple-Maresh, Kathleen L. Collins

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Figure 6

Insertion of constitutive promoter between Tat exons in 89.6 VT1 reduces Tat expression and increases latency.

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Insertion of constitutive promoter between Tat exons in 89.6 VT1 reduces...
(A) Top, diagram of 89.6 VT1 as described in Figure 1A legend. Bottom, diagram for dual reporter, 89.6 VT3, in which eGFP driven by the spleen focus forming virus promoter (pSFFV) was inserted in env between tat/rev exons instead of 3′ to the second tat exon as in 89.6 VT1. (B) Flow cytometric analysis of HEK293T cells transiently transfected with the indicated reporter construct plus a plasmid expressing tat89.6 as indicated. (C) Summary graph of tat/rev RT-qPCR analysis of RNA isolated from HEK293T cells transiently transfected as for panel B. Statistical significance was determined by 1-way ANOVA with Tukey’s multiple comparisons test comparisons. Mean values ± standard deviation are shown, from 3 independent experiments, ****P ≤ 0.0001. (D) Flow cytometric analysis of CEM-SS cells transduced with the indicated reporter virus, treated 2 dpi as indicated with PMA and ionomycin, and harvested 3 dpi. Similar results were obtained in 3 independent experiments.

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