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Variation in HIV-1 Tat activity is a key determinant in the establishment of latent infection
Francisco Gomez-Rivera, … , Marianne E. Yaple-Maresh, Kathleen L. Collins
Francisco Gomez-Rivera, … , Marianne E. Yaple-Maresh, Kathleen L. Collins
Published December 5, 2024
Citation Information: JCI Insight. 2025;10(2):e184711. https://doi.org/10.1172/jci.insight.184711.
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Research Article Infectious disease Virology

Variation in HIV-1 Tat activity is a key determinant in the establishment of latent infection

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Abstract

Despite effective treatment, human immunodeficiency virus (HIV) persists in optimally treated people as a transcriptionally silent provirus. Latently infected cells evade the immune system and the harmful effects of the virus, thereby creating a long-lasting reservoir of HIV. To gain a deeper insight into the molecular mechanisms of HIV latency establishment, we constructed a series of HIV-1 fluorescent reporter viruses that distinguish active versus latent infection. We unexpectedly observed that the proportion of active to latent infection depended on a limiting viral factor, which created a bottleneck that could be overcome by superinfection of the cell, T cell activation, or overexpression of HIV-1 transactivator of transcription (Tat). In addition, we found that tat and regulator of expression of virion proteins (Rev) expression levels varied among HIV molecular clones and that tat levels were an important variable in latency establishment. Lower rev levels limited viral protein expression whereas lower Tat levels or mutation of the Tat binding element promoted latent infection that was resistant to reactivation even in fully activated primary T cells. Nevertheless, we found that combinations of latency reversal agents targeting both cellular activation and histone acetylation pathways overcame deficiencies in the Tat/TAR axis of transcription regulation. These results provide additional insight into the mechanisms of latency establishment and inform Tat-centered approaches to cure HIV.

Authors

Francisco Gomez-Rivera, Valeri H. Terry, Cuie Chen, Mark M. Painter, Maria C. Virgilio, Marianne E. Yaple-Maresh, Kathleen L. Collins

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Figure 4

Variation in 5′ LTR sequence determines the proportion of actively versus latently infected quiescent CEM-SS cells.

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Variation in 5′ LTR sequence determines the proportion of actively versu...
(A) Diagram displaying the location in which donor-derived 5′ LTR sequences corresponding to HXB2 position 39 to 806 were substituted for the corresponding region in the 89.6 5′ LTR of VT1. (B) Flow cytometric analysis of CEM-SS cells transduced with 89.6 VT1 containing the indicated donor-derived 5′ LTR sequences, treated with PMA and ionomycin as indicated 2 dpi, and harvested 3 dpi. (C and D) Summary graphs of experiments performed as in B with increasing amounts of each reporter virus. Each point represents a technical replicate from 1 independent experiment. Similar results were obtained in 6 independent experiments. (Two of these experiments included VT1 and VT1Δvpr referred to in Figure 3.) Statistical significance was determined by Deming (Model II) linear regression (C and D). ***P ≤ 0.001.

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