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TNF drives aberrant BMP signaling to induce endothelial and mesenchymal dysregulation in pulmonary hypertension
Maria de la Luz Garcia-Hernandez, Javier Rangel-Moreno, Qingfu Xu, YeJin Jeong, Soumyaroop Bhattacharya, Ravi Misra, Stacey Duemmel, Ke Yuan, Benjamin D. Korman
Maria de la Luz Garcia-Hernandez, Javier Rangel-Moreno, Qingfu Xu, YeJin Jeong, Soumyaroop Bhattacharya, Ravi Misra, Stacey Duemmel, Ke Yuan, Benjamin D. Korman
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Research Article Inflammation Pulmonology Vascular biology

TNF drives aberrant BMP signaling to induce endothelial and mesenchymal dysregulation in pulmonary hypertension

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Abstract

The pathobiology of pulmonary hypertension (PH) is complex and multiple cell types contribute to disease pathogenesis. We sought to characterize the molecular crosstalk between endothelial and mesenchymal cells that promote PH in the tumor necrosis factor α–transgenic (TNF-Tg) model of PH. Pulmonary endothelial and mesenchymal cells were isolated from WT and TNF-Tg mice and underwent single-cell RNA sequencing. Data were analyzed using clustering, differential gene expression and pathway analysis, ligand-receptor interaction, transcription factor binding, and RNA velocity assessments. Significantly altered ligand-receptor interactions were confirmed with immunofluorescent staining. TNF-Tg mice had increases in smooth muscle cells and Col14+ fibroblasts, and reductions in general capillary (gCAP) endothelial cells, Col13+ fibroblasts, pericytes, and myofibroblasts. Pathway analysis demonstrated NF-κB–, JAK/STAT-, and interferon-mediated inflammation, endothelial apoptosis, loss of vasodilatory pathways, increased TGF-β signaling, and smooth muscle cell proliferation. Ligand-receptor analysis demonstrated a loss of BMPR2 signaling in TNF-Tg lungs and establishment of a maladaptive BMP signaling cascade, which functional studies revealed stemmed from endothelial NF-κB activation and subsequent endothelial SMAD2/3 signaling. This system highlights a complex set of changes in cellular composition, cell communication, and cell fate driven by TNF signaling that lead to aberrant BMP signaling that is critical for development of PH.

Authors

Maria de la Luz Garcia-Hernandez, Javier Rangel-Moreno, Qingfu Xu, YeJin Jeong, Soumyaroop Bhattacharya, Ravi Misra, Stacey Duemmel, Ke Yuan, Benjamin D. Korman

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Figure 6

Decreased angiogenesis and increased integrin/basement membrane signaling in TNF lungs.

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Decreased angiogenesis and increased integrin/basement membrane signalin...
(A) Loss of angiogenesis signaling in TNF-Tg mice. MultiNicheNet was used to identify ligand-receptor pairs that were specific to either WT or TNF conditions. WT lungs demonstrated strong Tek, Flt1, Kdr, and Ednrb interactions with Angt1, Vegfa, Gpc3, and Edn3, which were absent TNF-Tg conditions. (B) Increased TGF-β/integrin/basement membrane signaling in TNF-Tg lungs. TNF-Tg lungs demonstrated the presence of interactions between Itga2 (primarily in gCAP2 cells) and multiple collagen genes, Hspg2, and Tgfb1. (C) Decreased expression of Flt1 and Tek and increased expression of Col4a2 and Itga2 in TNF-Tg gCAP cells. Violin plots demonstrate expression across cell types. (D) Immunostaining confirms increased expression of Col4a1, Itga2, and Igfbp7 in TNF-Tg lungs. Original magnification × 200. (E) Circos plots indicating most differentially regulated ligand-receptor pairs ascertained by MultiNicheNet in WT lungs (left) and TNF-Tg (right) lungs; sender cells are listed on the bottom, while arrows point to receiver cells on the top.

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