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Antigen receptor stimulation induces purifying selection against pathogenic mitochondrial tRNA mutations
Jingdian Zhang, Camilla Koolmeister, Jinming Han, Roberta Filograna, Leo Hanke, Monika Àdori, Daniel J. Sheward, Sina Teifel, Shreekara Gopalakrishna, Qiuya Shao, Yong Liu, Keying Zhu, Robert A. Harris, Gerald McInerney, Ben Murrell, Mike Aoun, Liselotte Bäckdahl, Rikard Holmdahl, Marcin Pekalski, Anna Wedell, Martin Engvall, Anna Wredenberg, Gunilla B. Karlsson Hedestam, Xaquin Castro Dopico, Joanna Rorbach
Jingdian Zhang, Camilla Koolmeister, Jinming Han, Roberta Filograna, Leo Hanke, Monika Àdori, Daniel J. Sheward, Sina Teifel, Shreekara Gopalakrishna, Qiuya Shao, Yong Liu, Keying Zhu, Robert A. Harris, Gerald McInerney, Ben Murrell, Mike Aoun, Liselotte Bäckdahl, Rikard Holmdahl, Marcin Pekalski, Anna Wedell, Martin Engvall, Anna Wredenberg, Gunilla B. Karlsson Hedestam, Xaquin Castro Dopico, Joanna Rorbach
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Research Article Immunology Metabolism

Antigen receptor stimulation induces purifying selection against pathogenic mitochondrial tRNA mutations

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Abstract

Pathogenic mutations in mitochondrial (mt) tRNA genes that compromise oxidative phosphorylation (OXPHOS) exhibit heteroplasmy and cause a range of multisyndromic conditions. Although mitochondrial disease patients are known to suffer from abnormal immune responses, how heteroplasmic mtDNA mutations affect the immune system at the molecular level is largely unknown. Here, in mice carrying pathogenic C5024T in mt-tRNAAla and in patients with mitochondrial encephalomyopathy, lactic acidosis, stroke-like episodes (MELAS) syndrome carrying A3243G in mt-tRNALeu, we found memory T and B cells to have lower pathogenic mtDNA mutation burdens than their antigen-inexperienced naive counterparts, including after vaccination. Pathogenic burden reduction was less pronounced in myeloid compared with lymphoid lineages, despite C5024T compromising macrophage OXPHOS capacity. Rapid dilution of the C5024T mutation in T and B cell cultures could be induced by antigen receptor–triggered proliferation and was accelerated by metabolic stress conditions. Furthermore, we found C5024T to dysregulate CD8+ T cell metabolic remodeling and IFN-γ production after activation. Together, our data illustrate that the generation of memory lymphocytes shapes the mtDNA landscape, wherein pathogenic variants dysregulate the immune response.

Authors

Jingdian Zhang, Camilla Koolmeister, Jinming Han, Roberta Filograna, Leo Hanke, Monika Àdori, Daniel J. Sheward, Sina Teifel, Shreekara Gopalakrishna, Qiuya Shao, Yong Liu, Keying Zhu, Robert A. Harris, Gerald McInerney, Ben Murrell, Mike Aoun, Liselotte Bäckdahl, Rikard Holmdahl, Marcin Pekalski, Anna Wedell, Martin Engvall, Anna Wredenberg, Gunilla B. Karlsson Hedestam, Xaquin Castro Dopico, Joanna Rorbach

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Figure 5

C5024T dysregulates CD8+ T cell metabolic remodeling after activation.

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C5024T dysregulates CD8+ T cell metabolic remodeling after activation.
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(A) Mitochondrial membrane potential was measured using TMRM in ex vivo CD8+ T cell subsets from the spleens of C5024T (n = 5) and WT (n = 6) mice. Representative data from n = 3 per genotype are shown. (B) Seahorse Mito Stress test of ex vivo naive CD8+ T cells isolated from adult mice (n = 6 C5024T, n = 5 WT) and stimulated for 6 hours with anti-CD3/anti-CD28 beads and IL-2 before analysis. Data representative of 2 independent experiments (Supplemental Table 1). (C) nanoString metabolic gene module analysis of mRNA isolated from CD8+ T cells from young C5024T (n = 3) and WT (n = 4) mice stimulated for 6 hours with anti-CD3/anti-CD28 and IL-2. Hierarchical clustering of principle component differences in normalized gene expression per module is shown. One C5024T sample (from n = 4) did not pass QC and was excluded. (D) Proportion of IFN-γ+ cells in the latest division, assessed by flow cytometry after PMA/ionomycin restimulation of CD8+ T cells previously expanded for 5 days with anti-CD3/anti-CD28 and IL-2. C5024T (n = 8) and WT (n = 6). (E) Serum IFN-γ levels in C5024T (n = 15) and WT (n = 15) animals measured by electrochemiluminescence. (F) Serum IL-12p70 levels in C5024T (n = 14) and WT (n = 15) animals similarly measured. Two-tailed, unpaired t tests (A) or 2-tailed Mann-Whitney tests (B and D–F) were used to analyze the data.

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