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Antigen receptor stimulation induces purifying selection against pathogenic mitochondrial tRNA mutations
Jingdian Zhang, Camilla Koolmeister, Jinming Han, Roberta Filograna, Leo Hanke, Monika Àdori, Daniel J. Sheward, Sina Teifel, Shreekara Gopalakrishna, Qiuya Shao, Yong Liu, Keying Zhu, Robert A. Harris, Gerald McInerney, Ben Murrell, Mike Aoun, Liselotte Bäckdahl, Rikard Holmdahl, Marcin Pekalski, Anna Wedell, Martin Engvall, Anna Wredenberg, Gunilla B. Karlsson Hedestam, Xaquin Castro Dopico, Joanna Rorbach
Jingdian Zhang, Camilla Koolmeister, Jinming Han, Roberta Filograna, Leo Hanke, Monika Àdori, Daniel J. Sheward, Sina Teifel, Shreekara Gopalakrishna, Qiuya Shao, Yong Liu, Keying Zhu, Robert A. Harris, Gerald McInerney, Ben Murrell, Mike Aoun, Liselotte Bäckdahl, Rikard Holmdahl, Marcin Pekalski, Anna Wedell, Martin Engvall, Anna Wredenberg, Gunilla B. Karlsson Hedestam, Xaquin Castro Dopico, Joanna Rorbach
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Research Article Immunology Metabolism

Antigen receptor stimulation induces purifying selection against pathogenic mitochondrial tRNA mutations

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Abstract

Pathogenic mutations in mitochondrial (mt) tRNA genes that compromise oxidative phosphorylation (OXPHOS) exhibit heteroplasmy and cause a range of multisyndromic conditions. Although mitochondrial disease patients are known to suffer from abnormal immune responses, how heteroplasmic mtDNA mutations affect the immune system at the molecular level is largely unknown. Here, in mice carrying pathogenic C5024T in mt-tRNAAla and in patients with mitochondrial encephalomyopathy, lactic acidosis, stroke-like episodes (MELAS) syndrome carrying A3243G in mt-tRNALeu, we found memory T and B cells to have lower pathogenic mtDNA mutation burdens than their antigen-inexperienced naive counterparts, including after vaccination. Pathogenic burden reduction was less pronounced in myeloid compared with lymphoid lineages, despite C5024T compromising macrophage OXPHOS capacity. Rapid dilution of the C5024T mutation in T and B cell cultures could be induced by antigen receptor–triggered proliferation and was accelerated by metabolic stress conditions. Furthermore, we found C5024T to dysregulate CD8+ T cell metabolic remodeling and IFN-γ production after activation. Together, our data illustrate that the generation of memory lymphocytes shapes the mtDNA landscape, wherein pathogenic variants dysregulate the immune response.

Authors

Jingdian Zhang, Camilla Koolmeister, Jinming Han, Roberta Filograna, Leo Hanke, Monika Àdori, Daniel J. Sheward, Sina Teifel, Shreekara Gopalakrishna, Qiuya Shao, Yong Liu, Keying Zhu, Robert A. Harris, Gerald McInerney, Ben Murrell, Mike Aoun, Liselotte Bäckdahl, Rikard Holmdahl, Marcin Pekalski, Anna Wedell, Martin Engvall, Anna Wredenberg, Gunilla B. Karlsson Hedestam, Xaquin Castro Dopico, Joanna Rorbach

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Figure 2

C5024T reduces mt-tRNAAla levels and compromises OXPHOS in BMDMs.

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C5024T reduces mt-tRNAAla levels and compromises OXPHOS in BMDMs.
(A) Le...
(A) Left: Northern blot showing mt-tRNAAla, mt-tRNACys, and 5.8S RNA levels in C5024T (n = 4) and WT (n = 4) M0 BMDMs. Ear heteroplasmy levels at weaning are indicated above the respective lanes for mtDNA-mutant animals. Right: Quantification inset. (B) Western blot OXPHOS complex profiling in M0 BMDMs from C5024T (n = 5) and WT (n = 5) animals. Ear heteroplasmy levels at weaning are indicated above the respective lanes for mtDNA-mutant animals. (C) Seahorse Mito Stress test of C5024T (n = 5) and WT (n = 5) M0 BMDMs 24 hours after polarization from M0 macrophages. Data were normalized according to protein amount/well and are representative of 2 independent experiments (Supplemental Table 1). (D) Seahorse Mito Stress test of C5024T (n = 5) and WT (n = 5) M2 BMDMs 24 hours after polarization from M0 macrophages. Data were normalized according to protein amount/well and are representative of 2 independent experiments (Supplemental Table 1). (E) Cell surface expression of MHC class II (IA/IE) measured by flow cytometry in BMDMs from C5024T (n = 5) and WT (n = 5) mice. (F) Expression of MHC class II IA mRNA in C5024T (n = 4) and WT (n = 4) BMDM subsets measured by qPCR. Fold-change relative to β-actin. (G) Percentage of C5024T heteroplasmy (%T) in M0-, M1-, and M2-polarized cells. No statistically significant changes between the groups or within a mouse were observed in n = 9 C5024T samples. Each color represents an individual mouse. Two-tailed, unpaired t tests (A–F) or 2-tailed Mann-Whitney tests (G) were used to analyze the data. Bonferroni’s correction was applied to address the issue of multiple comparisons in G (α = 0.0166).

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