Hodgkin lymphoma cell lines are characterized by a specific miRNA expression profile

JH Gibcus, LP Tan, G Harms, RN Schakel, D de Jong… - Neoplasia, 2009 - Elsevier
JH Gibcus, LP Tan, G Harms, RN Schakel, D de Jong, T Blokzijl, P Möller, S Poppema
Neoplasia, 2009Elsevier
Hodgkin lymphoma (HL) is derived from preapoptotic germinal center B cells, although a
general loss of B cell phenotype is noted. Using quantitative reverse transcription-
polymerase chain reaction and miRNA microarray, we determined the microRNA (miRNA)
profile of HL and compared this with the profile of a panel of B-cell non-Hodgkin lymphomas.
The two methods showed a strong correlation for the detection of miRNA expression levels.
The HL-specific miRNA included miR-17-92 cluster members, miR-16, miR-21, miR-24, and …
Abstract
Hodgkin lymphoma (HL) is derived from preapoptotic germinal center B cells, although a general loss of B cell phenotype is noted. Using quantitative reverse transcription-polymerase chain reaction and miRNA microarray, we determined the microRNA (miRNA) profile of HL and compared this with the profile of a panel of B-cell non-Hodgkin lymphomas. The two methods showed a strong correlation for the detection of miRNA expression levels. The HL-specific miRNA included miR-17-92 cluster members, miR-16, miR-21, miR-24, and miR-155. Using a large panel of cell lines, we found differential expression between HL and other B-cell lymphoma-derived cell lines for 27 miRNA. A significant down-regulation in HL compared to non-Hodgkin lymphoma was observed only for miR-150. Next, we performed target gene validation of predicted target genes for miR-155, which is highly expressed in HL and is differentially expressed between HL and Burkitt lymphoma. Using luciferase reporter assays, we validated 11 predicted miR-155 target genes in three different HL cell lines. We demonstrated that AGTR1, FGF7, ZNF537, ZIC3, and IKBKE are true miR-155 target genes in HL.
Elsevier